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SCNpilot_cont_500_bf_scaffold_3337

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3337_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..1629
DNA (1629bp) protein (543aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNS6_NIAKG rbh
glucose-methanol-choline oxidoreductase rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:AEW01002.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3337_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1641..2219
DNA (579bp) protein (193aa)
Twin-arginine translocation pathway signal n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB94_NIAKG
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AEW02477.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3337_3
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2258..2689
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9R762_9BACE
Putative membrane protein {ECO:0000313|EMBL:EEO59103.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_cont_500_bf_scaffold_3337_4
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2703..3533
DNA (831bp) protein (277aa)
Membrane protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NFC8_ELIME rbh
Membrane protein {ECO:0000313|EMBL:EQB93579.1}; TaxID=1355388 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica 502.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3337_5
unknown

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3658..4125
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3337_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4445..5044
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003751B17
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU62771.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_3337_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6275..9703
DNA (3429bp) protein (1143aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLN1_NIAKG rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEV96600.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3337_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9715..11112
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLN0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96599.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3337_9
unknown

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comp(11207..11494)
DNA (288bp) protein (96aa)
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3337_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11491..11916)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLM8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96597.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3337_11
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12228..12737
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000347FB9C
Serine protease {ECO:0000313|EMBL:KHA63185.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3337_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12758..13093)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PGA2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59834.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_3337_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13587..14939
DNA (1353bp) protein (451aa)
UDP-N-acetylmuramate--L-alanine ligase; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] rbh
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000313|EMBL:AEW00682.1}; EC=6.3.2.8 {ECO:0000313|EMBL:AEW00682.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI65_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3337_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14968..15735
DNA (768bp) protein (256aa)
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] rbh
Exonuclease RNase T and DNA polymerase III n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI64_NIAKG rbh
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:AEW00681.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3337_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15836..16627
DNA (792bp) protein (264aa)
dolichyl-phosphate beta-D-mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] rbh
Dolichyl-phosphate beta-D-mannosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI63_NIAKG rbh
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:KIC90228.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_500_bf_scaffold_3337_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16629..17534
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI62_NIAKG rbh
Membrane protein {ECO:0000313|EMBL:KIC92929.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3337_17
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17556..18458)
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC92112.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_500_bf_scaffold_3337_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18499..20010)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K5X9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD58384.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3337_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20043..22205)
DNA (2163bp) protein (721aa)
TonB-dependent receptor plug n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K5X4_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:AKD54725.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
TonB-dependent receptor plug
Displaying 19 items

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