ggKbase home page

SCNpilot_cont_500_bf_scaffold_3577

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3577_1

Not on your lists

comp(2..217)
DNA (216bp) protein (72aa)
Amidohydrolase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PLJ3_CHIPD
Amidohydrolase family {ECO:0000313|EMBL:AIA14105.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
amidohydrolase
SCNpilot_cont_500_bf_scaffold_3577_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

382..1887
DNA (1506bp) protein (502aa)
L-amino-acid oxidase; K00274 monoamine oxidase [EC:1.4.3.4] rbh
L-amino-acid oxidase {ECO:0000313|EMBL:ACU57587.1}; EC=1.4.3.2 {ECO:0000313|EMBL:ACU57587.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
L-amino-acid oxidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBV9_CHIPD rbh
SCNpilot_cont_500_bf_scaffold_3577_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1933..3138
DNA (1206bp) protein (402aa)
class I and II aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Aminotransferase class I and II n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBW0_CHIPD rbh
Aminotransferase class I and II {ECO:0000313|EMBL:ACU57588.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_3577_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3160..4035
DNA (876bp) protein (292aa)
Hedgehog/intein hint domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBW1_CHIPD
Hedgehog/intein hint domain-containing protein
Hedgehog/intein hint domain protein {ECO:0000313|EMBL:ACU57589.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_3577_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4145..5179
DNA (1035bp) protein (345aa)
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] rbh
Glutamate 5-kinase {ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|SAAS:SAAS00186442};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Glutamate 5-kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCQ8_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3577_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5183..6427
DNA (1245bp) protein (415aa)
glutamate-5-semialdehyde dehydrogenase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] rbh
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella k
Gamma-glutamyl phosphate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCQ9_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3577_7
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6537..8045
DNA (1509bp) protein (503aa)
alpha-L-arabinofuranosidase; K01209 alpha-N-arabinofuranosidase [EC:3.2.1.55] rbh
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF13_CHIPD">RepID=C7PF13_CHIPD rbh
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:KIA91039.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
SCNpilot_cont_500_bf_scaffold_3577_8
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8055..9437
DNA (1383bp) protein (461aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Alpha-galactosidase (EC:3.2.1.22) rbh
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036D4161 rbh
SCNpilot_cont_500_bf_scaffold_3577_9
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9689..9862
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003782138
thiS; thiamine biosynthesis sulfur transfer protein; K03154 sulfur carrier protein
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ABG57531.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
SCNpilot_cont_500_bf_scaffold_3577_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9880..11511
DNA (1632bp) protein (544aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
phosphomethylpyrimidine synthase ThiC n=1 Tax=Flexithrix dorotheae RepID=UPI00037BE24E
hydroxymethylpyrimidine synthase
SCNpilot_cont_500_bf_scaffold_3577_11
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11508..12128
DNA (621bp) protein (207aa)
thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine phosphate pyrophosphorylase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKW6_9BACT
Thiamine phosphate pyrophosphorylase {ECO:0000313|EMBL:EAY28932.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
SCNpilot_cont_500_bf_scaffold_3577_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12118..12873
DNA (756bp) protein (252aa)
Phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037ED0D0
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase {ECO:0000313|EMBL:GAL87353.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
SCNpilot_cont_500_bf_scaffold_3577_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12861..14324
DNA (1464bp) protein (488aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
thiazole synthase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B4A628 rbh
thiazole-phosphate synthase; K03149 thiamine biosynthesis ThiG rbh
SCNpilot_cont_500_bf_scaffold_3577_14
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14321..15463
DNA (1143bp) protein (381aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D716_9BACT rbh
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EOZ92860.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
thiazole biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH rbh
SCNpilot_cont_500_bf_scaffold_3577_15
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15509..17470)
DNA (1962bp) protein (654aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZQF5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY27327.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3577_16
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17738..18595)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B71C1E rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23149.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
transcriptional regulator, AraC family
SCNpilot_cont_500_bf_scaffold_3577_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18723..19541
DNA (819bp) protein (273aa)
phytanoyl-CoA dioxygenase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B786E6
Uncharacterized protein {ECO:0000313|EMBL:ETZ23150.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
phytanoyl-CoA dioxygenase rbh
SCNpilot_cont_500_bf_scaffold_3577_18
unknown

Not on your lists

20083..20622
DNA (540bp) protein (180aa)

This feature has no annotations

Displaying 18 items

View Taxonomy