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SCNpilot_cont_500_bf_scaffold_3658

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3658_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..290
DNA (288bp) protein (96aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NAD(P)H-quinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD4_NIAKG
SCNpilot_cont_500_bf_scaffold_3658_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

302..2236
DNA (1935bp) protein (645aa)
NADH dehydrogenase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] rbh
NADH dehydrogenase subunit L n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD5_NIAKG rbh
NADH dehydrogenase {ECO:0000313|EMBL:KIC90067.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_500_bf_scaffold_3658_3
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2233..3567
DNA (1335bp) protein (445aa)
NADH dehydrogenase subunit m (EC:1.6.5.3); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] rbh
Proton-translocating NADH-quinone oxidoreductase chain M n=1 Tax=Tannerella sp. CAG:118 RepID=R5I891_9PORP rbh
Proton-translocating NADH-quinone oxidoreductase chain M {ECO:0000313|EMBL:CCY36554.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
SCNpilot_cont_500_bf_scaffold_3658_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3576..4988
DNA (1413bp) protein (471aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] rbh
NADH-quinone oxidoreductase subunit N n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD7_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3658_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4994..5383
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBD8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03438.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3658_6
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

5506..6096
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AI9_SOLUE
hypothetical protein
Tax=RBG_16_OP11_45_19_curated
SCNpilot_cont_500_bf_scaffold_3658_7
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6143..8608
DNA (2466bp) protein (822aa)
GHKL domain protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3ULP7_9LEPT rbh
GHKL domain protein {ECO:0000313|EMBL:EPG66065.1}; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
pleC; multi-sensor Hybrid histidine Kinase rbh
SCNpilot_cont_500_bf_scaffold_3658_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8613..8975
DNA (363bp) protein (121aa)
Response regulator receiver protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDJ0_NIAKG
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEW00440.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3658_9
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8972..9298)
DNA (327bp) protein (109aa)
Small multidrug resistance protein n=1 Tax=Flavobacterium sp. F52 RepID=J0RTU3_9FLAO
Multidrug resistance protein YkkD {ECO:0000313|EMBL:CEJ71714.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
small multidrug resistance protein; K11741 quaternary ammonium compound-resistance protein SugE
SCNpilot_cont_500_bf_scaffold_3658_10
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9374..9937)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E7D6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU91761.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
cyclic nucleotide-binding protein
SCNpilot_cont_500_bf_scaffold_3658_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10013..12052)
DNA (2040bp) protein (680aa)
phospholipase C, phosphocholine-specific (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3]
Phospholipase C, phosphocholine-specific {ECO:0000313|EMBL:AEI51775.1}; EC=3.1.4.3 {ECO:0000313|EMBL:AEI51775.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Phospholipase C, phosphocholine-specific n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQM5_RUNSL
SCNpilot_cont_500_bf_scaffold_3658_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11991..12623)
DNA (633bp) protein (211aa)
phosphocholine-specific phospholipase C; K01114 phospholipase C [EC:3.1.4.3]
Phospholipase C, phosphocholine-specific {ECO:0000313|EMBL:ACU58834.1}; EC=3.1.4.3 {ECO:0000313|EMBL:ACU58834.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036EB70C
SCNpilot_cont_500_bf_scaffold_3658_13
unknown

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comp(12643..12909)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3658_14
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13403..14959)
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003658A02
cell surface protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_cont_500_bf_scaffold_3658_15
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15043..15519)
DNA (477bp) protein (159aa)
NHL repeat-containing protein (Fragment) n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U190_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EZH74241.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
NHL repeat containing protein
SCNpilot_cont_500_bf_scaffold_3658_16
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15564..16313)
DNA (750bp) protein (250aa)
NHL repeat containing protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGW5_NIAKG
NHL repeat containing protein {ECO:0000313|EMBL:AHM61628.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
NHL repeat containing protein
SCNpilot_cont_500_bf_scaffold_3658_17
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16454..17266
DNA (813bp) protein (271aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YWR1_AEQSU
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AFL81429.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
SCNpilot_cont_500_bf_scaffold_3658_18
unknown

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17355..17840
DNA (486bp) protein (162aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3658_19
unknown

Not on your lists

18696..19457
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3658_20
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19494..20291
DNA (798bp) protein (266aa)
Regulatory protein LuxR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y3I6_PEDHD
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ACU03265.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_3658_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20330..21607)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAN1_CHIPD rbh
hypothetical protein; K09760 DNA recombination protein RmuC rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU62995.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_3658_22
unknown

Not on your lists

comp(21629..21985)
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3658_23
unknown

Not on your lists

22360..22755
DNA (396bp) protein (132aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3658_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22969..23562
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C1FCD
hypothetical protein; K09164 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI47412.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_500_bf_scaffold_3658_25
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23671..24111)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI0002D8850F
Lipocalin-like domain containing protein {ECO:0000313|EMBL:KDB10483.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3658_26
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24141..24902)
DNA (762bp) protein (254aa)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDH9_9GAMM rbh
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:GAL87106.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
3-ketoacyl-ACP reductase rbh
SCNpilot_cont_500_bf_scaffold_3658_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25771..26058)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKV6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99785.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3658_28
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26210..27334)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036EFC35 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC92322.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
lycopene cyclase
SCNpilot_cont_500_bf_scaffold_3658_29
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27384..27797)
DNA (414bp) protein (138aa)
Beta-carotene hydroxylase n=1 Tax=Polaribacter sp. MED152 RepID=A2U1W3_9FLAO
Beta-carotene hydroxylase {ECO:0000313|EMBL:KIC92321.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
crtZ1; beta-carotene hydroxylase
SCNpilot_cont_500_bf_scaffold_3658_30
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(27797..28612)
DNA (816bp) protein (272aa)
phytoene synthase (EC:2.5.1.32)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036637D0 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 44 in total

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