ggKbase home page

SCNpilot_cont_500_bf_scaffold_3731

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3731_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..602)
DNA (600bp) protein (200aa)
Membrane-flanked domain DUF304 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ9_NIAKG
membrane protein
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:AEV98892.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3731_2
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(647..1717)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000368EDB0
Uncharacterized protein {ECO:0000313|EMBL:KEO75374.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3731_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1725..3515)
DNA (1791bp) protein (597aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Elongation factor 4 n=1 Tax=Niabella soli DSM 19437 RepID=H1NJG7_9SPHI rbh
GTP-binding protein lepA; K03596 GTP-binding protein LepA rbh
SCNpilot_cont_500_bf_scaffold_3731_4
unknown

Not on your lists

3539..4204
DNA (666bp) protein (222aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3731_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4176..5003
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98516.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3731_6
GWA1_OP11_ACD12_44_24, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(4977..5669)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00031B176E
Methyltransferase type 11 {ECO:0000313|EMBL:KKT58941.1}; TaxID=1618437 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_44_24b.;"
methyltransferase
SCNpilot_cont_500_bf_scaffold_3731_7
unknown

Not on your lists

5723..5977
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3731_8
unknown

Not on your lists

comp(6194..6967)
DNA (774bp) protein (258aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3731_9
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(6997..8094)
DNA (1098bp) protein (366aa)
Radical SAM domain protein n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DRY9_METV3
Radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ADI35899.1}; TaxID=456320 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
SCNpilot_cont_500_bf_scaffold_3731_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8118..8876)
DNA (759bp) protein (253aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] rbh
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Triosephosphate isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS8_NIAKG rbh
SCNpilot_cont_500_bf_scaffold_3731_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8889..9686)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THS9_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV98524.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 11 items

View Taxonomy