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SCNpilot_cont_500_bf_scaffold_3865

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_3865_1
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1513)
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZF3_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK01278.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_3865_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1537..2982)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035F9AAA
RagB/SusD domain-containing protein
RagB/SusD domain protein {ECO:0000313|EMBL:ACT92826.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_3865_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2996..5011)
DNA (2016bp) protein (672aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSK5_DYAFD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACT92827.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_500_bf_scaffold_3865_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4956..5951)
DNA (996bp) protein (332aa)
TonB-dependent receptor plug n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GHS3_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH53448.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
SCNpilot_cont_500_bf_scaffold_3865_5
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6281..6718)
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF14948.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein id=7718589 bin=BACIGN_2 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3865_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6936..7736)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRU5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17986.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_3865_7
unknown

Not on your lists

7918..8034
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3865_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8134..8685
DNA (552bp) protein (184aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7Z1_9SPHI
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ30477.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_500_bf_scaffold_3865_9
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8798..9997
DNA (1200bp) protein (400aa)
anti-FecI sigma factor FecR n=1 Tax=Cytophagales str. B6 RepID=UPI0003B73B0A
FecR protein
FecR protein {ECO:0000313|EMBL:ACU02551.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_500_bf_scaffold_3865_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10148..13510
DNA (3363bp) protein (1121aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365A47B rbh
TonB-dependent receptor plug rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW02401.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_3865_11
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13523..15022
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036DD2AE rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EKF54304.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
SCNpilot_cont_500_bf_scaffold_3865_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15096..15749
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D45FA
G-D-S-L family lipolytic protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_cont_500_bf_scaffold_3865_13
unknown

Not on your lists

comp(15709..15954)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3865_14
unknown

Not on your lists

comp(16015..16170)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_3865_15
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16235..16837)
DNA (603bp) protein (201aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RPV2_9FLAO
AraC family transcriptional regulator {ECO:0000313|EMBL:KFC59794.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_3865_16
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16960..18309
DNA (1350bp) protein (450aa)
alpha-L-fucosidase n=1 Tax=Niabella aurantiaca RepID=UPI000360E633 rbh
Contig113, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75157.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase
SCNpilot_cont_500_bf_scaffold_3865_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18315..20408
DNA (2094bp) protein (698aa)
Alpha-glucosidase {ECO:0000313|EMBL:AEE51608.1}; EC=3.2.1.20 {ECO:0000313|EMBL:AEE51608.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
alpha-glucosidase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] rbh
alpha-glucosidase n=1 Tax=Rudanella lutea RepID=UPI0003653888 rbh
SCNpilot_cont_500_bf_scaffold_3865_18
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20424..21890
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002EAA808 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21299.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
alpha-L-fucosidase rbh
SCNpilot_cont_500_bf_scaffold_3865_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21976..22278
DNA (303bp) protein (101aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000369F17F
Displaying 19 items

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