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SCNpilot_cont_500_bf_scaffold_6673

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6673_1
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1279)
DNA (1278bp) protein (426aa)
Glycoside hydrolase family 2 sugar binding id=4724861 bin=GWC2_Bacteroidetes_40_22 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes rbh
beta-mannosidase
Tax=RBG_13_Bacteroidetes_43_22_curated
SCNpilot_cont_500_bf_scaffold_6673_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1287..1892)
DNA (606bp) protein (202aa)
biopolymer transporter TolR n=1 Tax=Segetibacter koreensis RepID=UPI00037270F6
Biopolymer transporter TolR {ECO:0000313|EMBL:AKD53885.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Periplasmic component of the Tol biopolymer transport system-like protein
SCNpilot_cont_500_bf_scaffold_6673_3
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1991..2734)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003654495
Biopolymer transporter TolR {ECO:0000313|EMBL:AKD55667.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Periplasmic component of the Tol biopolymer transport system-like protein
SCNpilot_cont_500_bf_scaffold_6673_4
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2844..3836)
DNA (993bp) protein (331aa)
Virulence protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZXA6_ORNRL rbh
virulence protein rbh
Virulence protein {ECO:0000313|EMBL:AFL96340.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG; 23171 / LMG 9086).;"
SCNpilot_cont_500_bf_scaffold_6673_5
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3896..4789)
DNA (894bp) protein (298aa)
xylose isomerase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B559AA rbh
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AHJ96999.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
xylose isomerase
SCNpilot_cont_500_bf_scaffold_6673_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4889..5764
DNA (876bp) protein (292aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBL9_NIAKG
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEV97129.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_6673_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5807..7957)
DNA (2151bp) protein (717aa)
AsmA family protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJB3_CHIPD rbh
AsmA family protein; K07289 AsmA protein rbh
AsmA family protein {ECO:0000313|EMBL:ACU61981.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_6673_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7975..9018)
DNA (1044bp) protein (348aa)
AsmA family protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXQ8_SOLCM
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:AFD05473.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_500_bf_scaffold_6673_9
unknown

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9111..9239
DNA (129bp) protein (43aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6673_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9243..9983)
DNA (741bp) protein (247aa)
Polysaccharide deacetylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD36_NIAKG
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEV98268.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_6673_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9980..10897)
DNA (918bp) protein (306aa)
Glycosyl transferase family 2 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD37_NIAKG rbh
family 2 glycosyl transferase rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEV98269.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_6673_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10978..12042)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00257.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_6673_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12042..12200)
DNA (159bp) protein (53aa)
TonB-dependent receptor plug n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R3_NIAKG
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEW00256.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 13 items

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