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SCNpilot_cont_500_bf_scaffold_7275

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7275_1
Brassica rapa, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

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comp(3..956)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4ELX5_BRARP
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra029795.1-P}; TaxID=51351 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica; pekinensis).;"
CDC48; cell division control protein 48-A; K13525 transitional endoplasmic reticulum ATPase
SCNpilot_cont_500_bf_scaffold_7275_2
Triticum aestivum, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(902..1456)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Brachypodium distachyon RepID=I1H9M9_BRADI
cell division control protein 48 homolog E-like; K13525 transitional endoplasmic reticulum ATPase
Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_5BL_6C845E184.1}; TaxID=4565 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.;" source="Triticum aestivum (Wheat).;"
SCNpilot_cont_500_bf_scaffold_7275_3
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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comp(1505..2071)
DNA (567bp) protein (189aa)
Cell division cycle protein 48 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2TZJ8_SALR5
Cell division cycle protein 48 {ECO:0000313|EMBL:EGD79022.1}; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
hypothetical protein; K13525 transitional endoplasmic reticulum ATPase
SCNpilot_cont_500_bf_scaffold_7275_4
Brassica napus, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(2216..2653)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4CAR8_BRARP
BnaC01g38940D protein {ECO:0000313|EMBL:CDY22207.1}; TaxID=3708 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica napus (Rape).;"
cell division cycle protein 48 homolog
SCNpilot_cont_500_bf_scaffold_7275_5
Brassica oleracea, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(3110..3607)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Brassica rapa subsp. pekinensis RepID=M4CRQ9_BRARP
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bo8g080950.1}; TaxID=109376 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica oleracea var. oleracea.;"
SURP and G-patch domain-containing protein 1-like protein-like; K13096 splicing factor 4
SCNpilot_cont_500_bf_scaffold_7275_6
unknown

Not on your lists

comp(3862..4482)
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_7
unknown

Not on your lists

5436..5891
DNA (456bp) protein (152aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_8
Callorhinchus milii, Callorhinchus, Chimaeriformes, Holocephali, Chordata, Metazoa

Not on your lists

6500..6883
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Mucor circinelloides f. circinelloides (strain 1006PhL) RepID=S2JCB2_MUCC1
GPN-loop GTPase 2-like protein {ECO:0000313|EMBL:AFP04746.1}; TaxID=7868 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus.;" source="Callorhinchus milii (Ghost shark).;"
GPN2; GPN-loop GTPase 2
SCNpilot_cont_500_bf_scaffold_7275_9
unknown

Not on your lists

6862..7011
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_10
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

Not on your lists

7282..7482
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus RepID=H3JL61_STRPU
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_027345-tr}; TaxID=7668 species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
similar to ATP binding domain 1 family, member B; K06883
SCNpilot_cont_500_bf_scaffold_7275_11
unknown

Not on your lists

7472..7702
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_12
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7950..9299)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VXM6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAB91675.1}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
Extensin-like protein
SCNpilot_cont_500_bf_scaffold_7275_13
unknown

Not on your lists

comp(9416..10471)
DNA (1056bp) protein (352aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_14
unknown

Not on your lists

comp(10499..10867)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_15
unknown

Not on your lists

comp(10879..11475)
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_16
Auxenochlorella protothecoides, Auxenochlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(11475..14264)
DNA (2790bp) protein (930aa)
Protein furry {ECO:0000313|EMBL:KFM28554.1}; TaxID=3075 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella.;" source="Auxenochlorella protothecoides (Green microalga) (Chlorella; protothecoides).;"
SCNpilot_cont_500_bf_scaffold_7275_17
unknown

Not on your lists

comp(14325..14612)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7275_18
unknown

Not on your lists

comp(14646..15182)
DNA (537bp) protein (179aa)

This feature has no annotations

Displaying 18 items

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