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SCNpilot_cont_500_bf_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 593 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_6_1
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(100..1293)
DNA (1194bp) protein (398aa)
Tyrosine recombinase XerC n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=XERC_HERA2
integrase; K04763 integrase/recombinase XerD
Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_500_bf_scaffold_6_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

1600..2100
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000371C931
Transcriptional activator ligand binding domain protein {ECO:0000313|EMBL:EFH80296.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
transcription activator, effector binding
SCNpilot_cont_500_bf_scaffold_6_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2186..2755)
DNA (570bp) protein (190aa)
Ferritin-like domain subfamily n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W3D9_9CYAN
Ferritin-like domain subfamily {ECO:0000313|EMBL:EDX71337.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_6_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3056..3919)
DNA (864bp) protein (288aa)
alpha/beta hydrolase fold protein id=14626502 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase fold protein
Tax=CSP1_6_Rokubacteria
SCNpilot_cont_500_bf_scaffold_6_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3953..4795)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y2E4_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP39657.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCNpilot_cont_500_bf_scaffold_6_6
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4856..6403)
DNA (1548bp) protein (516aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00035D6218
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EUJ10534.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_6_7
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6859..7809)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Chloroflexus RepID=A9WKA6_CHLAA
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABY35984.1}; Flags: Precursor;; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_500_bf_scaffold_6_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7861..8796)
DNA (936bp) protein (312aa)
Peptide ABC transporter, membrane protein n=2 Tax=Geobacter sulfurreducens RepID=D7AIL9_GEOSK
peptide ABC transporter, membrane protein; K02033 peptide/nickel transport system permease protein
Diguanylate cyclase {ECO:0000313|EMBL:AJY71684.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
SCNpilot_cont_500_bf_scaffold_6_9
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9001..10887)
DNA (1887bp) protein (629aa)
Extracellular solute-binding protein family 5 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3F7_GEODF
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Peptide ABC transporter, periplasmic peptide-binding lipoprotein {ECO:0000313|EMBL:ACM21378.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
SCNpilot_cont_500_bf_scaffold_6_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(11061..12182)
DNA (1122bp) protein (374aa)
Putative oligopeptide ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1L3_CALAS
putative oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Putative oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL99150.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_500_bf_scaffold_6_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12227..13255)
DNA (1029bp) protein (343aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7J4_SPHTD rbh
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein rbh
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ACZ37827.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_6_12
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists


comp(14020..16701)
DNA (2682bp) protein (894aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] rbh
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Valine--tRNA ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C479_SPHTD rbh
SCNpilot_cont_500_bf_scaffold_6_13
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16798..17274)
DNA (477bp) protein (159aa)
mycothiol biosynthesis acetyltransferase; K15520 mycothiol synthase [EC:2.3.1.189]
Acetyltransferase, GNAT family n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J4E9_9BACL
Acetyltransferase {ECO:0000313|EMBL:AHY47577.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
SCNpilot_cont_500_bf_scaffold_6_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(17693..18136)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002FE889A
acetyltransferase
Tax=RBG_16_Chloroflexi_63_12_curated
SCNpilot_cont_500_bf_scaffold_6_15
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18192..19049)
DNA (858bp) protein (286aa)
formyltetrahydrofolate deformylase (EC:3.5.1.10); K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10]
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
Formyltetrahydrofolate deformylase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1GYI8_METFK
SCNpilot_cont_500_bf_scaffold_6_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(19158..20309)
DNA (1152bp) protein (384aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:AEP12527.1}; EC=1.13.11.5 {ECO:0000313|EMBL:AEP12527.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EF7A9 rbh
SCNpilot_cont_500_bf_scaffold_6_17
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20522..23716)
DNA (3195bp) protein (1065aa)
Transglutaminase domain protein n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G564_CHLAD
transglutaminase domain-containing protein
Transglutaminase domain protein {ECO:0000313|EMBL:ACL23697.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_500_bf_scaffold_6_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(23792..25063)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C456_SPHTD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACZ39023.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_6_19
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(25223..26176)
DNA (954bp) protein (318aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase associated with various cellular activities AAA_3 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFW2_ROSCS rbh
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ABU56343.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_500_bf_scaffold_6_20
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26386..27753)
DNA (1368bp) protein (456aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
bifunctional folylpolyglutamate synthase/ dihydrofolate synthase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481CB7
Uncharacterized protein {ECO:0000313|EMBL:AIQ72012.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
SCNpilot_cont_500_bf_scaffold_6_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(27769..28620)
DNA (852bp) protein (284aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:ACZ42884.1}; EC=1.1.1.31 {ECO:0000313|EMBL:ACZ42884.1};; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGL3_THET1
SCNpilot_cont_500_bf_scaffold_6_22
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(28796..29380)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDT3_THET1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ41089.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_6_23
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(29546..30256)
DNA (711bp) protein (237aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NS22_ROSCS rbh
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABU60368.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_500_bf_scaffold_6_24
unknown

Not on your lists

comp(30309..30557)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6_25
CG_Dehalo_02, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(30627..32357)
DNA (1731bp) protein (577aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA63_9CHLR
Tax=CG_Dehalo_02
SCNpilot_cont_500_bf_scaffold_6_26
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32383..33876)
DNA (1494bp) protein (498aa)
ABC transporter, solute-binding protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2ZC20_9FIRM
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KFM83877.1}; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_6_27
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

34337..35260
DNA (924bp) protein (308aa)
GCN5-related N-acetyltransferase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IG25_9CHLR
GCN5-related N-acetyltransferase
Tax=BJP_08E140C01_Anaerolineales_40_8
SCNpilot_cont_500_bf_scaffold_6_28
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

35274..35954
DNA (681bp) protein (227aa)
Ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QMU0_9CYAN
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase
Ubiquinone/menaquinone biosynthesis methyltransferase {ECO:0000313|EMBL:AGY58904.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
SCNpilot_cont_500_bf_scaffold_6_29
unknown

Not on your lists

comp(36146..36895)
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_6_30
unknown

Not on your lists

37252..37740
DNA (489bp) protein (163aa)

This feature has no annotations

Displaying items 1-30 of 593 in total

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