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SCNpilot_cont_500_bf_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_162_1
unknown

Not on your lists

3..95
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_162_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(255..1043)
DNA (789bp) protein (263aa)
Putative transmembrane anti-sigma factor n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG29_9CHLR
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:EFH88731.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
prtR; putative transmembrane anti-sigma factor
SCNpilot_cont_500_bf_scaffold_162_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(1033..1539)
DNA (507bp) protein (169aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG28_9CHLR
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH88730.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
ECF family RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_500_bf_scaffold_162_4
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1975..3456
DNA (1482bp) protein (494aa)
Metallophosphoesterase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZY1_GRAMM
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AEU35697.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SCNpilot_cont_500_bf_scaffold_162_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(3523..4296)
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU98_9CHLR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH83999.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_162_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4507..5130
DNA (624bp) protein (208aa)
Transcriptional regulator, TetR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVQ1_9CHLR
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH84284.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
putative TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_162_7

Not on your lists

5207..6688
DNA (1482bp) protein (494aa)
Arylsulfatase n=2 Tax=Bacteroides RepID=A7V656_BACUN rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL99915.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sulfatase rbh
SCNpilot_cont_500_bf_scaffold_162_8
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6716..8095
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036A00DE rbh
sulfatase
Tax=GWF2_Verrucomicrobia_62_7_curated
SCNpilot_cont_500_bf_scaffold_162_9
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8425..11742
DNA (3318bp) protein (1106aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D6B7 rbh
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EMS69389.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_162_10
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(11750..14632)
DNA (2883bp) protein (961aa)
Transcriptional activator domain id=2289630 bin=GWB2_Chloroflexi_54_36 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81 rbh
transcriptional activator domain-containing protein rbh
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_500_bf_scaffold_162_11
unknown

Not on your lists

15048..15371
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_162_12
unknown

Not on your lists

15440..17041
DNA (1602bp) protein (534aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_162_13
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17725..19890)
DNA (2166bp) protein (722aa)
glycoside hydrolase clan GH-D; K07407 alpha-galactosidase [EC:3.2.1.22] rbh
Alpha-galactosidase n=1 Tax=Paenibacillus sp. JCM 10914 RepID=V9GCY8_9BACL rbh
Alpha-galactosidase {ECO:0000313|EMBL:GAE07677.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. JCM 10914.;"
SCNpilot_cont_500_bf_scaffold_162_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(20135..21703)
DNA (1569bp) protein (523aa)
hutH; histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] rbh
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Histidine ammonia-lyase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4T1_CALAS rbh
SCNpilot_cont_500_bf_scaffold_162_15
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(21700..22971)
DNA (1272bp) protein (424aa)
hutI; imidazolonepropionase; K01468 imidazolonepropionase [EC:3.5.2.7] rbh
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Imidazolonepropionase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I699_CALAS rbh
SCNpilot_cont_500_bf_scaffold_162_16
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(22982..24637)
DNA (1656bp) protein (552aa)
hutU; urocanate hydratase; K01712 urocanate hydratase [EC:4.2.1.49] rbh
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Urocanate hydratase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6R2_CALAS rbh
SCNpilot_cont_500_bf_scaffold_162_17
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(24658..25608)
DNA (951bp) protein (317aa)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAJ6_CHLAD rbh
Arginase/agmatinase/formiminoglutamase rbh
Arginase/agmatinase/formiminoglutamase {ECO:0000313|EMBL:ACL26571.1}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_500_bf_scaffold_162_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

25836..27194
DNA (1359bp) protein (453aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] rbh
Molybdenum cofactor synthesis domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2T2_SPHTD rbh
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:ACZ38549.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_162_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(27365..27985)
DNA (621bp) protein (207aa)
Transcriptional regulatory protein liaR n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ED54_9CHLR
Transcriptional regulatory protein liaR {ECO:0000313|EMBL:CCF82616.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
LuxR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_162_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28056..29270)
DNA (1215bp) protein (405aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Two-component hybrid sensor and regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PGV3_9DELT
sasA4; adaptive-response sensory-kinase
SCNpilot_cont_500_bf_scaffold_162_21
RLO_PLX_64_10, Bacteria

Not on your lists

comp(29765..30424)
DNA (660bp) protein (220aa)
Two component transcriptional regulator, LuxR family id=3202284 bin=GWC2_Methylomirabilis_70_16 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LuxR family DNA-binding response regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCNpilot_cont_500_bf_scaffold_162_22
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30562..33738)
DNA (3177bp) protein (1059aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TYS0_9CYAN
PAS domain S-box protein {ECO:0000313|EMBL:AHY46230.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
multi-sensor signal transduction histidine kinase
SCNpilot_cont_500_bf_scaffold_162_23
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(33716..34096)
DNA (381bp) protein (127aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5T7M0_9PLAN
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EMI41526.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
putative PAS/PAC sensor protein
SCNpilot_cont_500_bf_scaffold_162_24
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34093..37011)
DNA (2919bp) protein (973aa)
signal transduction histidine kinase with CheB and CheR activity; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] rbh
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
Signal transduction histidine kinase with CheB and CheR activity n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JWV2_BURP8 rbh
SCNpilot_cont_500_bf_scaffold_162_25
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(37209..38135)
DNA (927bp) protein (309aa)
CheB methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00031CC97F rbh
Chemotaxis protein CheB {ECO:0000313|EMBL:KIJ84286.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
SCNpilot_cont_500_bf_scaffold_162_26
Paenibacillus sp. FSL R5-0912, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38835..40805)
DNA (1971bp) protein (657aa)
hypothetical protein; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177] rbh
family 31 glucosidase n=1 Tax=Paenibacillus massiliensis RepID=UPI00035F007A rbh
Family 31 glucosidase {ECO:0000313|EMBL:AIQ40834.1}; TaxID=1536771 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0912.;"
SCNpilot_cont_500_bf_scaffold_162_27
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41392..43158)
DNA (1767bp) protein (589aa)
Glycoside hydrolase family 2 sugar binding n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D1B7_PAESJ rbh
family 2 glycoside hydrolase rbh
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:ACT03745.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
SCNpilot_cont_500_bf_scaffold_162_28
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43225..46350)
DNA (3126bp) protein (1042aa)
Alpha-mannosidase {ECO:0000313|EMBL:EMS73704.1}; EC=3.2.1.24 {ECO:0000313|EMBL:EMS73704.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
alpha-mannosidase (EC:3.2.1.24) rbh
Alpha-mannosidase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FX18_9CLOT rbh
SCNpilot_cont_500_bf_scaffold_162_29
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46605..47210)
DNA (606bp) protein (202aa)
Transcriptional repressor, CopY family n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIS9_ROSCS
CopY family transcriptional regulator {ECO:0000313|EMBL:KJS23200.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
CopY family transcriptional regulator; K07737 putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_162_30
Bacillus sp. JCM 19047, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

47569..47844
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WF81_BACSK
Repressor CsoR of the copZA operon {ECO:0000313|EMBL:GAF22690.1}; TaxID=1460641 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19047.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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