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SCNpilot_cont_500_bf_scaffold_243

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_243_1
unknown

Not on your lists

3..101
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_243_2
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

417..5045
DNA (4629bp) protein (1543aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=RPOC_ROSS1 rbh
SCNpilot_cont_500_bf_scaffold_243_3
unknown

Not on your lists

comp(5123..5314)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_243_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5549..6577
DNA (1029bp) protein (343aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002E2F361
Putative 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (Cobalamin-independent methionine synthase) {ECO:0000313|EMBL:CDN52470.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_243_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(6690..7115)
DNA (426bp) protein (142aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured bacterium RepID=K2D5P3_9BACT
N-acetyltransferase GCN5
Tax=RBG_16_Zixibacteria_50_21_curated
SCNpilot_cont_500_bf_scaffold_243_6
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7289..7552
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C4705
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA60634.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
SCNpilot_cont_500_bf_scaffold_243_7
unknown

Not on your lists

7564..8592
DNA (1029bp) protein (343aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_243_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8601..9260)
DNA (660bp) protein (220aa)
2-haloalkanoic acid dehalogenase, type II (EC:3.8.1.2)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E8Q0_9ACTN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
SCNpilot_cont_500_bf_scaffold_243_9
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

Not on your lists

comp(9257..10027)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036E9BCA
Uncharacterized protein {ECO:0000313|EMBL:KKQ87428.1}; TaxID=1618334 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_38_9.;"
hypothetical protein; K06966
SCNpilot_cont_500_bf_scaffold_243_10
unknown

Not on your lists

10260..10676
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_243_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10781..12016)
DNA (1236bp) protein (412aa)
Phthalate 4,5-dioxygenase oxygenase subunit {ECO:0000313|EMBL:GAO53302.1}; EC=1.14.12.7 {ECO:0000313|EMBL:GAO53302.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WJL4_BURSC
Rieske (2Fe-2S) iron-sulfur domain-containing protein
SCNpilot_cont_500_bf_scaffold_243_12
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12523..13533)
DNA (1011bp) protein (337aa)
Transcriptional regulator n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K6Y3_HALHC
transcriptional regulator
Tax=RBG_16_RIF_CHLX_69_14_curated
SCNpilot_cont_500_bf_scaffold_243_13
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(13783..14901)
DNA (1119bp) protein (373aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FC84_PAEMK rbh
binding-protein-dependent transport system inner membrane component; K10234 alpha-glucoside transport system permease protein rbh
Tax=RBG_16_Chloroflexi_51_16_curated
SCNpilot_cont_500_bf_scaffold_243_14
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14901..16019)
DNA (1119bp) protein (373aa)
ABC transporter n=1 Tax=Paenibacillus sanguinis RepID=UPI0003646B9F rbh
binding-protein-dependent transport system inner membrane component; K10233 alpha-glucoside transport system permease protein rbh
Tax=RBG_16_RIF_CHLX_69_14_curated
SCNpilot_cont_500_bf_scaffold_243_15
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16251..17861)
DNA (1611bp) protein (537aa)
ABC transporter, solute-binding protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J096_9BACL rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIL35192.1}; TaxID=1590652 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
ABC transporter substrate-binding protein; K10232 alpha-glucoside transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_243_16
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18783..22034
DNA (3252bp) protein (1084aa)
Two-component hybrid sensor and regulator n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3B0_ANATU
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAJ62924.1}; TaxID=926569 species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
SCNpilot_cont_500_bf_scaffold_243_17
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22031..23320)
DNA (1290bp) protein (430aa)
GCN5-related N-acetyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MKC1_ALKOO rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABW20253.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
SCNpilot_cont_500_bf_scaffold_243_18
unknown

Not on your lists

23544..23735
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_243_19
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24022..24681)
DNA (660bp) protein (220aa)
NADPH-dependent F420 reductase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JA92_FRASU
NADPH-dependent F420 reductase; K06988
NADPH-dependent F420 reductase {ECO:0000313|EMBL:ADP79794.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_243_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

24895..25839
DNA (945bp) protein (315aa)
Glycosyl hydrolase, family 43 n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J1R3_9BACL
Glycoside hydrolase family 43 {ECO:0000313|EMBL:AIE84498.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
glycoside hydrolase
SCNpilot_cont_500_bf_scaffold_243_21
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(25836..26756)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002EC2EAE
LysR family transcriptional regulator {ECO:0000313|EMBL:KIJ83203.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_243_22
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26912..27835
DNA (924bp) protein (308aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XKA4_9CHRO
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AFZ32509.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
SCNpilot_cont_500_bf_scaffold_243_23
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(27832..28836)
DNA (1005bp) protein (335aa)
Integrase family protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZQC1_ANACC
Integrase {ECO:0000313|EMBL:KIF12488.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
integrase family protein
SCNpilot_cont_500_bf_scaffold_243_24
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(29050..29922)
DNA (873bp) protein (291aa)
Auxin Efflux Carrier n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFZ8_THET1
auxin efflux carrier family protein; K07088
Tax=RBG_16_Chloroflexi_57_9_curated
SCNpilot_cont_500_bf_scaffold_243_25
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(30004..30585)
DNA (582bp) protein (194aa)
Acetyltransferase MshD n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3I7_CALAS
mshD; acetyltransferase MshD
Acetyltransferase MshD {ECO:0000313|EMBL:BAL99824.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_cont_500_bf_scaffold_243_26
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

30750..31517
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ICY0_9CHLR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFO80950.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_243_27
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

31535..32317
DNA (783bp) protein (261aa)
surE; 5'-nucleotidase (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE id=1742437 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=GWB2_Chloroflexi_54_36_curated
SCNpilot_cont_500_bf_scaffold_243_28
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32363..33160
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D8U4_MYXXD
enoyl-CoA hydratase/isomerase family protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
SCNpilot_cont_500_bf_scaffold_243_29
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(33309..34295)
DNA (987bp) protein (329aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFH83659.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EFH83659.1};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTA8_9CHLR
SCNpilot_cont_500_bf_scaffold_243_30
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34292..34672)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXG2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN95511.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Displaying items 1-30 of 80 in total

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