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SCNpilot_cont_500_bf_scaffold_546

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_546_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_2
unknown

Not on your lists

390..626
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_3
unknown

Not on your lists

699..935
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_4
unknown

Not on your lists

985..1212
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1285..1983)
DNA (699bp) protein (233aa)
Putative transcriptional regulator n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8YWJ9_9GAMM
MerR family transcriptional regulator
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_500_bf_scaffold_546_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

2139..2843
DNA (705bp) protein (235aa)
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC20_THET1
SCNpilot_cont_500_bf_scaffold_546_7
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

3025..3999
DNA (975bp) protein (325aa)
Acetyl xylan esterase; K01060 cephalosporin-C deacetylase [EC:3.1.1.41] rbh
Acetyl xylan esterase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIM8_ROSCS rbh
Acetyl xylan esterase {ECO:0000313|EMBL:ABU57328.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
SCNpilot_cont_500_bf_scaffold_546_8
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

4181..5464
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9N2_SPHTD rbh
major facilitator superfamily MFS_1 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACZ40525.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_546_9
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5571..5810)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00036BFC5A
type 2 lantibiotic, mersacidin/lichenicidin family
Type 2 lantibiotic, mersacidin/lichenicidin family {ECO:0000313|EMBL:AFY46403.1}; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
SCNpilot_cont_500_bf_scaffold_546_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

6143..7327
DNA (1185bp) protein (395aa)
Putative AttH id=3326866 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
SCNpilot_cont_500_bf_scaffold_546_11
unknown

Not on your lists

7334..7978
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_12
Thermosynechococcus elongatus, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7984..8817)
DNA (834bp) protein (278aa)
Tll2177 protein n=1 Tax=Thermosynechococcus elongatus (strain BP-1) RepID=Q8DGY5_THEEB
hypothetical protein; K09134 hypothetical protein
Tll2177 protein {ECO:0000313|EMBL:BAC09729.1}; TaxID=197221 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus elongatus (strain BP-1).;"
SCNpilot_cont_500_bf_scaffold_546_13
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8819..9652)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00037156F8
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADR35618.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
SCNpilot_cont_500_bf_scaffold_546_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9659..10207)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036E2961
Uncharacterized protein {ECO:0000313|EMBL:EXG79607.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_546_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10572..11285
DNA (714bp) protein (238aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU5_RUBXD rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABG05533.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
SCNpilot_cont_500_bf_scaffold_546_16
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

11301..12416
DNA (1116bp) protein (372aa)
Queuosine biosynthesis protein; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
Queuosine biosynthesis protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG87_MEISD rbh
SCNpilot_cont_500_bf_scaffold_546_17
unknown

Not on your lists

12693..12881
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13069..14454)
DNA (1386bp) protein (462aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
UPI00034A3353 related cluster n=1 Tax=unknown RepID=UPI00034A3353
beta-glucosidase rbh
SCNpilot_cont_500_bf_scaffold_546_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(14503..15591)
DNA (1089bp) protein (363aa)
Transcriptional regulator, LacI family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TV67_9CHLR
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EFH84167.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_546_20
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

15963..17087
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A3H0_DEIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ67984.1}; Flags: Precursor;; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
SCNpilot_cont_500_bf_scaffold_546_21
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17272..18339
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z0S1_9NEIS rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
SCNpilot_cont_500_bf_scaffold_546_22
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18381..19622
DNA (1242bp) protein (414aa)
cat3; hypothetical protein (EC:2.8.3.8)
Acetyl-CoA hydrolase/transferase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NFI5_9FIRM
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EGO65184.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
SCNpilot_cont_500_bf_scaffold_546_23
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

19955..22183
DNA (2229bp) protein (743aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] rbh
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDJ7_THET1 rbh
SCNpilot_cont_500_bf_scaffold_546_24
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(22294..22701)
DNA (408bp) protein (136aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PQ57_9CYAN
integral membrane sensor hybrid histidine kinase
Tax=RBG_13_Nitrospirae_39_12_curated
SCNpilot_cont_500_bf_scaffold_546_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(22978..24531)
DNA (1554bp) protein (518aa)
Pyrrolo-quinoline quinone n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4K3_9CHLR rbh
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EFH81433.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Pyrrolo-quinoline quinone rbh
SCNpilot_cont_500_bf_scaffold_546_26
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24717..25517
DNA (801bp) protein (267aa)
Transcriptional regulator n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DAA5_9BACI
Transcriptional regulator {ECO:0000313|EMBL:EKN65259.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
yurK; transcriptional regulator; K03710 GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_546_27
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

25913..26584
DNA (672bp) protein (224aa)
Chromosome undetermined scaffold_112, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0BKH8_PARTE
hypothetical protein
Chromosome undetermined scaffold_112, whole genome shotgun sequence {ECO:0000313|EMBL:CAK59045.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Paramecium tetraurelia.;"
SCNpilot_cont_500_bf_scaffold_546_28

Not on your lists

comp(26617..27786)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003663685
Marine sediment metagenome DNA, contig: S01H1_L00866 {ECO:0000313|EMBL:GAF71329.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ribonuclease
SCNpilot_cont_500_bf_scaffold_546_29
unknown

Not on your lists

comp(27797..28441)
DNA (645bp) protein (215aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_546_30
unknown

Not on your lists

comp(28531..28665)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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