ggKbase home page

SCNpilot_cont_500_bf_scaffold_596

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_596_1
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(101..1738)
DNA (1638bp) protein (546aa)
Phosphoglucomutase, alpha-D-glucose phosphate-specific {ECO:0000313|EMBL:EHC12840.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EHC12840.1};; TaxID=741277 species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2] rbh
phosphoglucomutase n=1 Tax=Fischerella thermalis RepID=UPI0002FFBA7D rbh
SCNpilot_cont_500_bf_scaffold_596_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2307..2651)
DNA (345bp) protein (115aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U842_9CHLR
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:EFH80053.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_596_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

2758..4089
DNA (1332bp) protein (444aa)
Drug resistance transporter, Bcr/CflA subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0Z0_9CHLR rbh
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EFH82480.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
bcr; MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_cont_500_bf_scaffold_596_4
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4142..5071)
DNA (930bp) protein (310aa)
mycothiol biosynthesis acetyltransferase; K15520 mycothiol synthase [EC:2.3.1.189]
Mycothiol acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01698}; Short=MSH acetyltransferase {ECO:0000255|HAMAP-Rule:MF_01698};; EC=2.3.1.189 {ECO:0000255|HAMAP-Rule:MF_01698};; Mycothiol synthase {ECO:0000255|HAMAP-Rule:MF_01698}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
Mycothiol acetyltransferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=MSHD_THEBD
SCNpilot_cont_500_bf_scaffold_596_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5372..6859
DNA (1488bp) protein (496aa)
glutamine synthetase, type I (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Glutamine synthetase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7W1_SPHTD rbh
SCNpilot_cont_500_bf_scaffold_596_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

7014..8807
DNA (1794bp) protein (598aa)
Transcriptional regulator, CdaR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TIG3_9CHLR
Transcriptional regulator, CdaR {ECO:0000313|EMBL:EFH89220.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
sugar diacid utilization regulator
SCNpilot_cont_500_bf_scaffold_596_7
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(9044..9829)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CE34_THET1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ41190.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
SCNpilot_cont_500_bf_scaffold_596_8
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(9832..10662)
DNA (831bp) protein (277aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (Catechol pathway) n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVD9_9BACT
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (Catechol pathway) {ECO:0000313|EMBL:CCW35733.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
SCNpilot_cont_500_bf_scaffold_596_9
unknown

Not on your lists

comp(10760..11266)
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_596_10
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

11861..13129
DNA (1269bp) protein (423aa)
Cell wall hydrolase/autolysin n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ICI4_9CHLR
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EFO81112.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
cell wall hydrolase/autolysin
SCNpilot_cont_500_bf_scaffold_596_11
unknown

Not on your lists

13226..13786
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_596_12
unknown

Not on your lists

13820..15082
DNA (1263bp) protein (421aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_596_13
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

15363..15683
DNA (321bp) protein (107aa)
Alkylated DNA repair protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X2I1_9NOST
alkylated DNA repair protein
Alkylated DNA repair protein {ECO:0000313|EMBL:AFZ26648.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
SCNpilot_cont_500_bf_scaffold_596_14
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15934..17361
DNA (1428bp) protein (476aa)
Hemolysins and related proteins containing CBS domains id=2254250 bin=GWB2_Clostridiales_37_7 species=Caloramator australicus genus=Caloramator taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good + rbh
hypothetical protein; K03699 putative hemolysin rbh
Tax=BJP_08E140C01_Clostridiales_46_19
SCNpilot_cont_500_bf_scaffold_596_15
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

17584..18420
DNA (837bp) protein (279aa)
Transcriptional regulator, TrmB n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1V9_HERA2
transcriptional regulator TrmB
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ABX05401.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_500_bf_scaffold_596_16
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18422..19411
DNA (990bp) protein (330aa)
Tungstate ABC transporter permease n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DP71_9BACI
Tungstate ABC transporter permease {ECO:0000313|EMBL:EKN62576.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
ABC-type tungstate transport system, permease component
SCNpilot_cont_500_bf_scaffold_596_17
unknown

Not on your lists

19793..20419
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_596_18
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(20556..22088)
DNA (1533bp) protein (511aa)
Type II secretion system protein E n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G6N3_CHLAD rbh
type II secretion system protein E; K02283 pilus assembly protein CpaF rbh
Type II secretion system protein E {ECO:0000313|EMBL:ACL25842.1}; Flags: Precursor;; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
SCNpilot_cont_500_bf_scaffold_596_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(22092..23411)
DNA (1320bp) protein (440aa)
AAA ATPase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2C9_SPHTD rbh
AAA ATPase rbh
AAA ATPase {ECO:0000313|EMBL:ACZ38396.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_596_20
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(23485..24912)
DNA (1428bp) protein (476aa)
ugp; UTP--glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase id=3744785 bin=GWF2_Lentisphaerae_57_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
Tax=GWF2_Lentisphaerae_57_35_curated
SCNpilot_cont_500_bf_scaffold_596_21
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25074..25823)
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D6U5_PAESJ
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:AIQ17722.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
SCNpilot_cont_500_bf_scaffold_596_22
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(25963..27183)
DNA (1221bp) protein (407aa)
Rhomboid family protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHH8_9CHLR
Rhomboid family protein {ECO:0000313|EMBL:EFO79341.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
rhomboid family protein
SCNpilot_cont_500_bf_scaffold_596_23
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(27362..28468)
DNA (1107bp) protein (369aa)
signal transduction histidine kinase, nitrate/nitrite-specific, NarQ (EC:2.7.3.-); K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
ATP-binding region ATPase domain protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DV09_DESRL
Tax=RIFOXYA1_FULL_Alicyclobacillus_53_8_curated
SCNpilot_cont_500_bf_scaffold_596_24
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

28691..29431
DNA (741bp) protein (247aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2E5_DEHLB
Putative two-component system response regulator {ECO:0000313|EMBL:AKG54369.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
LuxR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_596_25
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

29817..32024
DNA (2208bp) protein (736aa)
Putative uncharacterized protein id=4681051 bin=GWA2_Elusimicrobia_56_46 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
SCNpilot_cont_500_bf_scaffold_596_26
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32234..32560)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Brevibacillus RepID=L5MSN5_9BACL
Putative pyrophosphatase {ECO:0000313|EMBL:EJL44004.1}; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_596_27
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(32610..33326)
DNA (717bp) protein (239aa)
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:ACZ41701.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ACZ41701.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFJ5_THET1 rbh
SCNpilot_cont_500_bf_scaffold_596_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(33380..35125)
DNA (1746bp) protein (582aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
succinate dehydrogenase or fumarate reductase, flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP45_9CHLR rbh
SCNpilot_cont_500_bf_scaffold_596_29
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(35157..35615)
DNA (459bp) protein (153aa)
Succinate dehydrogenase hydrophobic membrane anchor protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2G7_SPHTD
succinate dehydrogenase hydrophobic membrane anchor protein; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase hydrophobic membrane anchor protein {ECO:0000313|EMBL:ACZ38434.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_596_30
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35673..36026)
DNA (354bp) protein (118aa)
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:EKP94701.1}; EC=1.3.5.1 {ECO:0000313|EMBL:EKP94701.1};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
Succinate dehydrogenase subunit C n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDE8_9FIRM
succinate dehydrogenase, cytochrome b556 subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
Displaying items 1-30 of 40 in total

View Taxonomy