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SCNpilot_cont_500_bf_scaffold_42_11

Organism: SCNPILOT_CONT_500_BF_Chloroflexi_54_19

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(10820..11476)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RPP6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 28.7
  • Coverage: 160.0
  • Bit_score: 78
  • Evalue 8.00e-12
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 160.0
  • Bit_score: 78
  • Evalue 2.50e-12
Tax=RBG_16_Chloroflexi_68_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.0
  • Coverage: 203.0
  • Bit_score: 90
  • Evalue 2.90e-15

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Taxonomy

RBG_16_Chloroflexi_68_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 657
ATGCCAGAAGGTTTATTTGAGACTTCCCCGGTCGAACGAACTGCCCCGGAAGCTGCCGGTCTTTCGGCGAAACAACAGAGCAAACGTGACGCGATTGTCGAGGCCGCTACCGACCTTTTTACCAACGGCGGTTACGAGACGACCACGATTGCCCATATCGCGAAAAAGGCCGGGGTCGCGGTCGGTACCGTCTATCTCTATTTCAAAAACAAGCAGGAAATTCTTTACGCGGTCAAGTACGACTTTGATGCCGCCTTTGCCCGAATGATGGCCCACGCCGGGGCGAATAATCTTCCCCACCGGCAGCGCCTTCAGGCGTTAATCAAGTCCATTTTTAACGTCTGCGCCGAGAATACCGAGCGTATCCAACTGCTGGGTCTGCCGCCCCAGGCAATCGGAGAGATATTCGAGGCCAAACGTACTATTAAGAACTCTTCGGTGATGATACAGGGTGTCGAAACCTGGATAAAGCAGGGTATCGCGGAAGGAGCCTTTCGCCCGGTTGACCCCTATATAGCCGCAGTGATTGGGCACGGGATGGTCAACGCCAGCCTCGAACAATGTTTCAATGTGGATAATGGCAAAAACCAGCAATTGTATATTGATTCGCTGGTAGACAGTATCAGCCGCTGGCTGTTCGAGCCCGAATACCTGTAA
PROTEIN sequence
Length: 219
MPEGLFETSPVERTAPEAAGLSAKQQSKRDAIVEAATDLFTNGGYETTTIAHIAKKAGVAVGTVYLYFKNKQEILYAVKYDFDAAFARMMAHAGANNLPHRQRLQALIKSIFNVCAENTERIQLLGLPPQAIGEIFEAKRTIKNSSVMIQGVETWIKQGIAEGAFRPVDPYIAAVIGHGMVNASLEQCFNVDNGKNQQLYIDSLVDSISRWLFEPEYL*