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SCNpilot_cont_500_bf_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 447 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_42_1
unknown

Not on your lists

112..450
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42_2
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(531..1475)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002EC2EAE
LysR family transcriptional regulator {ECO:0000313|EMBL:KIF21090.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_42_3
unknown

Not on your lists

1834..1968
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_42_4
R_NC10_66_22, NC10, Bacteria

Not on your lists

2116..3000
DNA (885bp) protein (295aa)
ABC-type transporter, integral membrane subunit id=4115449 bin=GWF2_Methylomirabilis_70_14 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
SCNpilot_cont_500_bf_scaffold_42_5
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3047..4144
DNA (1098bp) protein (366aa)
Inner-membrane translocator n=1 Tax=Geobacillus sp. (strain C56-T3) RepID=D7D7N1_GEOSC
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
ABC transporter permease {ECO:0000313|EMBL:AGT31807.1}; TaxID=1345697 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
SCNpilot_cont_500_bf_scaffold_42_6
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

4144..4902
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002E0987C
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
Tax=RBG_16_Chloroflexi_57_9_curated
SCNpilot_cont_500_bf_scaffold_42_7
Geobacillus sp. WSUCF1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4911..5618
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI0002E3AC7B
Branched-chain amino acid transport ATP-binding protein livF {ECO:0000313|EMBL:EPR28137.1}; TaxID=886559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. WSUCF1.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_42_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

5814..7022
DNA (1209bp) protein (403aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
xylose isomerase, Arthrobacter type (EC:5.3.1.5) rbh
Xylose isomerase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD36_9CHLR rbh
SCNpilot_cont_500_bf_scaffold_42_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

7129..8274
DNA (1146bp) protein (382aa)
FAD dependent oxidoreductase; K00301 sarcosine oxidase [EC:1.5.3.1] rbh
FAD dependent oxidoreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7K7_SPHTD rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACZ37840.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_42_10
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8271..10607)
DNA (2337bp) protein (779aa)
MMPL domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0E8_9CHLR rbh
MMPL domain protein {ECO:0000313|EMBL:EFH82288.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
MMPL domain-containing protein; K06994 putative drug exporter of the RND superfamily
SCNpilot_cont_500_bf_scaffold_42_11
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10820..11476)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RPP6_9PSED
TetR family transcriptional regulator
Tax=RBG_16_Chloroflexi_68_14_curated
SCNpilot_cont_500_bf_scaffold_42_12
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11786..12529
DNA (744bp) protein (248aa)
Type 11 methyltransferase n=1 Tax=Burkholderia terrae BS001 RepID=I5CML8_9BURK
Putative methyltransferase {ECO:0000313|EMBL:ETY77882.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
type 11 methyltransferase
SCNpilot_cont_500_bf_scaffold_42_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12596..13840)
DNA (1245bp) protein (415aa)
Phthalate 4,5-dioxygenase oxygenase subunit {ECO:0000313|EMBL:GAO53302.1}; EC=1.14.12.7 {ECO:0000313|EMBL:GAO53302.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WJL4_BURSC
Rieske (2Fe-2S) iron-sulfur domain-containing protein
SCNpilot_cont_500_bf_scaffold_42_14
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14316..14792
DNA (477bp) protein (159aa)
MarR family transcriptional regulator n=1 Tax=Streptomyces acidiscabies RepID=UPI00028974FA
MarR family transcriptional regulator {ECO:0000313|EMBL:KDQ02008.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_42_15
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14853..15842
DNA (990bp) protein (330aa)
NADPH:quinone reductase and related Zn-dependent oxidoreductase n=3 Tax=Amycolatopsis mediterranei RepID=D8HTZ9_AMYMU rbh
NADPH:quinone reductase and related Zn-dependent oxidoreductase rbh
NADPH:quinone reductase and related Zn-dependent oxidoreductase {ECO:0000313|EMBL:AEK44653.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_42_16
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15848..17554)
DNA (1707bp) protein (569aa)
Peptidase M23 family protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5F3_ANATU
peptidase M23 family protein
Tax=CG_Anaero_03
SCNpilot_cont_500_bf_scaffold_42_17
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17733..18632)
DNA (900bp) protein (300aa)
ABC transporter ATP-binding protein n=1 Tax=Kribbella catacumbae RepID=UPI00035EE99E
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDQ65823.1}; TaxID=1487711 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
ABC transporter permease; K09819 manganese/iron transport system permease protein
SCNpilot_cont_500_bf_scaffold_42_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18632..19576)
DNA (945bp) protein (315aa)
ABC-3 protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7E4_CONWI
ABC transporter; K09819 manganese/iron transport system permease protein
ABC-3 protein {ECO:0000313|EMBL:ADB50806.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
SCNpilot_cont_500_bf_scaffold_42_19
Bacillus halodurans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19595..20428)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002D6EEBB
ABC transporter ATP-binding protein; K09820 manganese/iron transport system ATP-binding protein
Manganese transport system ATP-binding protein MntB; TaxID=272558 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM; 9153 / C-125).;"
SCNpilot_cont_500_bf_scaffold_42_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20519..21532)
DNA (1014bp) protein (338aa)
ABC-type metal ion transporter, periplasmic subunit n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AX21_FRADG
Manganese ABC transporter {ECO:0000313|EMBL:ETK34190.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
metal ion ABC transporter periplasmic protein; K02077 zinc/manganese transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_42_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

21918..22496
DNA (579bp) protein (193aa)
Transcriptional regulator, PadR-like family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUM2_9CHLR
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:EFH84090.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PadR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_42_22
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

22533..24110
DNA (1578bp) protein (526aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1V7_HERA2 rbh
EmrB/QacA family drug resistance transporter rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABX05399.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCNpilot_cont_500_bf_scaffold_42_23
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24208..24795)
DNA (588bp) protein (196aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLW3_SIDLE
bifunctional deaminase-reductase domain protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADE12558.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
SCNpilot_cont_500_bf_scaffold_42_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25287..26321
DNA (1035bp) protein (345aa)
sigma 54 interacting domain-containing protein; K03924 MoxR-like ATPase [EC:3.6.3.-]
MoxR-like ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WS25_9BURK
MoxR-like ATPase {ECO:0000313|EMBL:EHR72343.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
SCNpilot_cont_500_bf_scaffold_42_25
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26311..27288
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR66_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95503.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_cont_500_bf_scaffold_42_26
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27352..28347
DNA (996bp) protein (332aa)
von Willebrand factor type A n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HR65_RUBGI
von Willebrand factor type A; K07114 uncharacterized protein
von Willebrand factor type A {ECO:0000313|EMBL:BAL95502.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
SCNpilot_cont_500_bf_scaffold_42_27
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28638..29840)
DNA (1203bp) protein (401aa)
Purine-binding protein BAB2_0673 n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EDU7_9FIRM rbh
Purine-binding protein BAB2_0673 {ECO:0000313|EMBL:CCO06976.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
putative ABC-type transport system, periplasmic component/surface lipoprotein; K07335 basic membrane protein A and related proteins rbh
SCNpilot_cont_500_bf_scaffold_42_28
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29908..30855)
DNA (948bp) protein (316aa)
Putative ABC-type transport system, permease component n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7J2D1_DESMD rbh
ABC transporter permease {ECO:0000313|EMBL:KJS46409.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
ABC transporter permease rbh
SCNpilot_cont_500_bf_scaffold_42_29
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30858..32018)
DNA (1161bp) protein (387aa)
Nucleoside ABC transporter membrane protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RH40_MOOTA rbh
inner-membrane translocator; K02057 simple sugar transport system permease protein rbh
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:ABC20249.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella thermoacetica (strain ATCC 39073).;"
SCNpilot_cont_500_bf_scaffold_42_30
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(32030..33643)
DNA (1614bp) protein (538aa)
putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
Putative ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZ22_CALAS rbh
Tax=S_OP1_64_32
Displaying items 1-30 of 447 in total

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