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SCNpilot_cont_500_bf_scaffold_18984

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_18984_1
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..272
DNA (270bp) protein (90aa)
CitB domain-containing protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0G9_9BRAD
Protein TcuB {ECO:0000313|EMBL:EGP08242.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
citB; citrate utilization protein B
SCNpilot_cont_500_bf_scaffold_18984_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(439..1650)
DNA (1212bp) protein (404aa)
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAU4_9BRAD rbh
ABC transporter permease {ECO:0000313|EMBL:KJC60967.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
urea/short-chain binding protein of ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_18984_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1788..2459)
DNA (672bp) protein (224aa)
RES domain-containing protein n=2 Tax=Rhizobium etli RepID=S5SST5_RHIET rbh
RES domain-containing protein rbh
RES domain-containing protein {ECO:0000313|EMBL:AGS24679.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_500_bf_scaffold_18984_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2456..2926)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000372B59E
Uncharacterized protein {ECO:0000313|EMBL:KIZ44443.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_18984_5
unknown

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3005..3373
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_18984_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3497..4663
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DDA77D rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS40023.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
SCNpilot_cont_500_bf_scaffold_18984_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4997..6580
DNA (1584bp) protein (528aa)
CzcA family heavy metal efflux pump n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PN69_9BRAD
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKS39783.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cation efflux system protein CzcA; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_500_bf_scaffold_18984_8
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6609..7775
DNA (1167bp) protein (389aa)
CzcA family heavy metal efflux pump n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PGW2_9BRAD
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKS40024.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
SCNpilot_cont_500_bf_scaffold_18984_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8044..8355
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210G8_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD89218.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_18984_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8549..9238)
DNA (690bp) protein (230aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
glgX; glycogen operon protein GlgX (EC:3.2.1.-); K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen debranching enzyme GlgX n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8V6_9BRAD
Displaying 10 items

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