ggKbase home page

SCNpilot_cont_500_bf_scaffold_4189

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4189_1
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74..865
DNA (792bp) protein (264aa)
Diguanylate cyclase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TG84_MESCW
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADV12354.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_4189_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(882..2714)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTB4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX13021.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
HerA-ATP synthase, barrel domain; K06915
SCNpilot_cont_500_bf_scaffold_4189_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3109..4896
DNA (1788bp) protein (596aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGK6_9RHIZ
SCNpilot_cont_500_bf_scaffold_4189_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4931..5503
DNA (573bp) protein (191aa)
ilvH; acetolactate synthase 3 regulatory subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ABG62885.1}; EC=2.2.1.6 {ECO:0000313|EMBL:ABG62885.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Acetolactate synthase, small subunit n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11I90_MESSB
SCNpilot_cont_500_bf_scaffold_4189_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5932..7200
DNA (1269bp) protein (423aa)
UPI0003CEA9F5 related cluster n=1 Tax=unknown RepID=UPI0003CEA9F5
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CDX35180.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA
SCNpilot_cont_500_bf_scaffold_4189_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7197..8999
DNA (1803bp) protein (601aa)
UPI0003CF9137 related cluster n=1 Tax=unknown RepID=UPI0003CF9137
Multidrug efflux system, subunit C {ECO:0000313|EMBL:CDX12995.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_500_bf_scaffold_4189_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8939..10306
DNA (1368bp) protein (456aa)
UPI0003CF9137 related cluster n=1 Tax=unknown RepID=UPI0003CF9137
Multidrug transporter {ECO:0000313|EMBL:ESW86322.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_500_bf_scaffold_4189_8
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10555..11019
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C40E5
oxidoreductase iron-sulfur binding subunit
Oxidoreductase iron-sulfur binding subunit {ECO:0000313|EMBL:BAJ82697.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_500_bf_scaffold_4189_9
unknown

Not on your lists

comp(11010..12125)
DNA (1116bp) protein (372aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_10
unknown

Not on your lists

comp(12101..12223)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_11
unknown

Not on your lists

comp(12279..12476)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4189_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12865..13212
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B11DE
oxidoreductase molybdopterin binding protein
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein {ECO:0000313|EMBL:ABQ32195.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_500_bf_scaffold_4189_13
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13350..14477
DNA (1128bp) protein (376aa)
UPI0003CECD92 related cluster n=1 Tax=unknown RepID=UPI0003CECD92
ATP-binding protein {ECO:0000313|EMBL:ESY23781.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4189_14
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15084..15482)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00035DBD1E
Mll3904 protein {ECO:0000313|EMBL:BAQ17068.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
signal peptide protein
SCNpilot_cont_500_bf_scaffold_4189_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15596..16003)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MJG6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20855.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4189_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16115..16861
DNA (747bp) protein (249aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
pyridoxine 5'-phosphate synthase; K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] rbh
Pyridoxine 5'-phosphate synthase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHI3_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_4189_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17038..18957
DNA (1920bp) protein (640aa)
Potassium transporter Kup n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G3M8_9RHIZ
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
potassium transporter; K03549 KUP system potassium uptake protein
SCNpilot_cont_500_bf_scaffold_4189_18
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19121..19726
DNA (606bp) protein (202aa)
UPI0003D05E1C related cluster n=1 Tax=unknown RepID=UPI0003D05E1C
Membrane protein {ECO:0000313|EMBL:ESZ24179.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K09928 hypothetical protein
SCNpilot_cont_500_bf_scaffold_4189_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19726..20136
DNA (411bp) protein (137aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071085}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00071082};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQP8_9RHIZ
SCNpilot_cont_500_bf_scaffold_4189_20
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20215..20964
DNA (750bp) protein (250aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
signal peptidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037827FD rbh
SCNpilot_cont_500_bf_scaffold_4189_21
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20981..21613
DNA (633bp) protein (211aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
rncS; ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3]
ribonuclease III n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036BBDDA
SCNpilot_cont_500_bf_scaffold_4189_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21610..22185
DNA (576bp) protein (192aa)
GTPase Era n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F900_9RHIZ
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
era; GTP-binding protein Era; K03595 GTP-binding protein Era
Displaying 22 items

View Taxonomy