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SCNpilot_cont_500_bf_scaffold_4354

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4354_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(106..1851)
DNA (1746bp) protein (582aa)
Sodium/hydrogen exchanger n=1 Tax=Afipia sp. 1NLS2 RepID=D6V293_9BRAD
Sodium/hydrogen exchanger {ECO:0000313|EMBL:EFI52073.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative cation:proton antiport protein; K03455 monovalent cation:H+ antiporter-2, CPA2 family
SCNpilot_cont_500_bf_scaffold_4354_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2103..2930
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E6B2A7 rbh
hypothetical protein
UspA {ECO:0000313|EMBL:ABE37586.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_4354_3
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3121..5808)
DNA (2688bp) protein (896aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] rbh
Alanine--tRNA ligase n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=SYA_NITWN rbh
SCNpilot_cont_500_bf_scaffold_4354_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6263..7414
DNA (1152bp) protein (384aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P9J4_9BRAD
SCNpilot_cont_500_bf_scaffold_4354_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7424..7789
DNA (366bp) protein (122aa)
glycine cleavage system protein H n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DC78E4
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
gcvH; glycine cleavage system protein H; K02437 glycine cleavage system H protein
SCNpilot_cont_500_bf_scaffold_4354_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7876..8547
DNA (672bp) protein (224aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2]
glycine dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000305CCB2
Displaying 6 items

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