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SCNpilot_cont_500_bf_scaffold_4370

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4370_1
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(47..1024)
DNA (978bp) protein (326aa)
C4-dicarboxylate-binding protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JQU7_AGRVS rbh
C4-dicarboxylate-binding protein rbh
C4-dicarboxylate-binding protein {ECO:0000313|EMBL:ACM35360.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_4370_2
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1125..1973
DNA (849bp) protein (283aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JIS5_9RHOB
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKE70509.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_4370_3
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2138..3622
DNA (1485bp) protein (495aa)
FAD-binding dehydrogenase {ECO:0000313|EMBL:KGJ02750.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;"
FAD binding domain protein id=2858728 bin=GWF1_Rhodobacteraceae_65_7 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
putative FAD-binding dehydrogenase
SCNpilot_cont_500_bf_scaffold_4370_4
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3959..5179)
DNA (1221bp) protein (407aa)
Replication protein C n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AH1_MESSB rbh
replication initiation protein RepC rbh
Replication protein C {ECO:0000313|EMBL:ABG65604.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_4370_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5368..6405)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375E261 rbh
Plasmid partitioning protein ParB {ECO:0000313|EMBL:EXL06713.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
repb3; putative replication protein B rbh
SCNpilot_cont_500_bf_scaffold_4370_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6494..7720)
DNA (1227bp) protein (409aa)
chromosome partitioning protein ParA n=1 Tax=Aureimonas ureilytica RepID=UPI0003812808 rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:EZQ15849.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
cobyrinic acid ac-diamide synthase rbh
SCNpilot_cont_500_bf_scaffold_4370_7
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7961..8215)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVL7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG63823.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4370_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8364..9476)
DNA (1113bp) protein (371aa)
Phage integrase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MP1_MESSB rbh
phage integrase rbh
Phage integrase {ECO:0000313|EMBL:ABG61328.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_4370_9
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9586..9864
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H3M2_RHILT
ABC transporter {ECO:0000313|EMBL:EZQ14539.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4370_10
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9944..10351
DNA (408bp) protein (136aa)
UPI0003CE81A3 related cluster n=1 Tax=unknown RepID=UPI0003CE81A3
Acetyltransferase {ECO:0000313|EMBL:EXL04910.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
Displaying 10 items

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