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SCNpilot_cont_500_bf_scaffold_4769

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4769_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..799)
DNA (798bp) protein (266aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE66_9GAMM
SCNpilot_cont_500_bf_scaffold_4769_2
unknown

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comp(1253..1558)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4769_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1758..3122)
DNA (1365bp) protein (455aa)
Major facilitator superfamily MFS_1 n=2 Tax=Sphingopyxis RepID=Q1GWZ6_SPHAL
MFS transporter {ECO:0000313|EMBL:EZQ12907.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
major facilitator superfamily transporter
SCNpilot_cont_500_bf_scaffold_4769_4
unknown

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comp(3145..3408)
DNA (264bp) protein (88aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4769_5

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3556..5085
DNA (1530bp) protein (510aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SCN4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO04701.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
3-octaprenyl-4-hydroxybenzoate decarboxylase
SCNpilot_cont_500_bf_scaffold_4769_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5082..5648
DNA (567bp) protein (189aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
bsdB; phenolic acid decarboxylase subunit B (EC:4.1.1.- 4.1.1.61)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003674FA5
SCNpilot_cont_500_bf_scaffold_4769_7
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5706..6425)
DNA (720bp) protein (240aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A7L9_STAND
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADH88467.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_4769_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6698..7969)
DNA (1272bp) protein (424aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hemN; oxygen-independent coproporphyrinogen-III oxidase HemN (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
coproporphyrinogen III oxidase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B77195
Displaying 8 items

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