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SCNpilot_cont_500_bf_scaffold_4910

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4910_1
unknown

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1..72
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4910_2
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(575..1357)
DNA (783bp) protein (261aa)
Putative short chain dehydrogenase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZI78_ROSLO rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KAJ02602.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
short chain dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_4910_3
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1302..2264)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEL3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KAJ02600.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_4910_4
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2266..3216)
DNA (951bp) protein (317aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZI81_ROSLO rbh
3-hydroxyacyl-CoA dehydrogenase rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AEI96217.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;"
SCNpilot_cont_500_bf_scaffold_4910_5
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(3290..4456)
DNA (1167bp) protein (389aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9J8_SPHTD rbh
inner-membrane translocator; K10544 D-xylose transport system permease protein rbh
Inner-membrane translocator {ECO:0000313|EMBL:ACZ40491.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_4910_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(4525..5301)
DNA (777bp) protein (259aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9J9_SPHTD rbh
ABC transporter rbh
ABC transporter related protein {ECO:0000313|EMBL:ACZ40492.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
SCNpilot_cont_500_bf_scaffold_4910_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5341..6420)
DNA (1080bp) protein (360aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=3 Tax=Acidiphilium RepID=A5FZZ2_ACICJ
putative ABC transporter substrate-binding protein; K10543 D-xylose transport system substrate-binding protein
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EGO96333.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCNpilot_cont_500_bf_scaffold_4910_8
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6680..7558
DNA (879bp) protein (293aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6W8_9RHIZ rbh
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:CCV12041.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
SMP-30/Gluconolaconase/LRE domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_4910_9
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7625..8710
DNA (1086bp) protein (362aa)
Transcriptional regulator (LacI family protein) n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CEL5_9RHOB rbh
HTH-type LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
Transcriptional regulator (LacI family protein) {ECO:0000313|EMBL:EAR51117.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
SCNpilot_cont_500_bf_scaffold_4910_10
unknown

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comp(8924..9034)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 10 items

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