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SCNpilot_cont_500_bf_scaffold_5418

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5418_1
unknown

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2..103
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5418_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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183..1109
DNA (927bp) protein (309aa)
hypothetical protein; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKW2_NITHX
Uncharacterized protein {ECO:0000313|EMBL:ABE63135.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5418_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1255..2271
DNA (1017bp) protein (339aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] rbh
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V600_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_5418_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2268..3134
DNA (867bp) protein (289aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
Ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000255|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00607}; TaxID=316056 species="Bacteria; Proteobacteria
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RSMA_RHOPB
SCNpilot_cont_500_bf_scaffold_5418_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3147..4205
DNA (1059bp) protein (353aa)
alcohol dehydrogenase GroES domain-containing protein; K00001 alcohol dehydrogenase [EC:1.1.1.1] rbh
NAD-dependent alcohol dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003046855 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig183, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45932.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_5418_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4396..5760
DNA (1365bp) protein (455aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUB4_RHOP2
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:KIZ45516.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
peptidase C14, caspase catalytic subunit p20
SCNpilot_cont_500_bf_scaffold_5418_7
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5780..6328
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9C6_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL77363.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_500_bf_scaffold_5418_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6403..6960
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VRY1_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJN08957.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
SCNpilot_cont_500_bf_scaffold_5418_9
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6988..7608)
DNA (621bp) protein (207aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000255|HAMAP-Rule:MF_00328}; EC=2.7.4.8 {ECO:0000255|HAMAP-Rule:MF_00328};; GMP kinase {ECO:0000255|HAMAP-Rule:MF_00328}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
Guanylate kinase n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=KGUA_BRADU
SCNpilot_cont_500_bf_scaffold_5418_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7612..8331)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q215S8_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87858.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Displaying 10 items

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