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SCNpilot_cont_500_bf_scaffold_5548

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5548_1
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..836
DNA (834bp) protein (278aa)
Glutamate synthase subunit beta {ECO:0000313|EMBL:EKF17005.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EKF17005.1};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glutamate synthase NADH/NADPH small subunit; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase subunit beta n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7L1_9RHIZ
SCNpilot_cont_500_bf_scaffold_5548_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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833..1342
DNA (510bp) protein (170aa)
gltD; glutamate synthase subunit beta; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:ABG64120.1}; EC=1.4.1.14 {ECO:0000313|EMBL:ABG64120.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Ahrensia kielensis RepID=UPI000379D985
SCNpilot_cont_500_bf_scaffold_5548_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1346..2356)
DNA (1011bp) protein (337aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZN7_9RHIZ rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EHK53844.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_5548_4
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2502..3500)
DNA (999bp) protein (333aa)
ATP-binding transport protein smoK n=1 Tax=Rhizobium sp. RepID=L0NKX8_RHISP
Glycerol-3-phosphate ABC transporter ATPase {ECO:0000313|EMBL:KEQ04365.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
ABC transporter; K02023 multiple sugar transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_5548_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3556..3855)
DNA (300bp) protein (100aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ64_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK59227.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transmembrane component of ABC transporter; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_5548_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3852..4331)
DNA (480bp) protein (160aa)
sugar ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F54642
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK59227.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_5548_7
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4339..5184)
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodobacter sp. SW2 RepID=C8RWZ8_9RHOB
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EEW26523.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_cont_500_bf_scaffold_5548_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5262..6521)
DNA (1260bp) protein (420aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XF72_RHIFR
family 1 extracellular solute-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:AFL54528.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_5548_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..7799
DNA (885bp) protein (295aa)
UPI0003CFCB4E related cluster n=1 Tax=unknown RepID=UPI0003CFCB4E
N-acetylglucosamine kinase {ECO:0000313|EMBL:ESZ13551.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
BadF/BadG/BcrA/BcrD type ATPase rbh
SCNpilot_cont_500_bf_scaffold_5548_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7792..8559
DNA (768bp) protein (256aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ69_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EHK59232.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_5548_11
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8572..9600
DNA (1029bp) protein (343aa)
UPI0003CE3E70 related cluster n=1 Tax=unknown RepID=UPI0003CE3E70
Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:CDX53857.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative phosphosugar isomerase
SCNpilot_cont_500_bf_scaffold_5548_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9597..10757
DNA (1161bp) protein (387aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ71_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_5548_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10883..11449)
DNA (567bp) protein (189aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M776_9RHIZ
Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein {ECO:0000313|EMBL:EKF16875.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
peptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_5548_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11400..11861)
DNA (462bp) protein (154aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU08_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK55768.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_5548_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11858..12907)
DNA (1050bp) protein (350aa)
ABC transporter ATP-binding protein (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU07_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EHK55801.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_5548_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12904..13860)
DNA (957bp) protein (319aa)
ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU06_9RHIZ rbh
ABC transporter permease {ECO:0000313|EMBL:EHK55800.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_5548_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13857..14837)
DNA (981bp) protein (327aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU05_9RHIZ
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK55799.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_5548_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14902..16434)
DNA (1533bp) protein (511aa)
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU04_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EHK55798.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
Displaying 18 items

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