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SCNpilot_cont_500_bf_scaffold_5739

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5739_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..870
DNA (870bp) protein (290aa)
tdh1; L-threonine 3-dehydrogenase Tdh (EC:1.1.1.103) rbh
Putative L-threonine 3-dehydrogenase Tdh {ECO:0000313|EMBL:AFL50469.1}; EC=1.1.1.103 {ECO:0000313|EMBL:AFL50469.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
Putative L-threonine 3-dehydrogenase Tdh n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3L3_RHIFR rbh
SCNpilot_cont_500_bf_scaffold_5739_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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891..1685
DNA (795bp) protein (265aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3L2_RHIFR rbh
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase rbh
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:AFL50468.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_5739_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1705..3018
DNA (1314bp) protein (438aa)
Carbohydrate kinase FGGY n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3L1_RHIFR rbh
fGGY; carbohydrate kinase FGGY rbh
Carbohydrate kinase FGGY {ECO:0000313|EMBL:AFL50467.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_5739_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3073..4161
DNA (1089bp) protein (363aa)
yurJ4; ABC transporter ATP-binding protein YurJ (EC:3.6.3.-) rbh
Putative ABC transporter ATP-binding protein YurJ {ECO:0000313|EMBL:AFL50466.1}; EC=3.6.3.- {ECO:0000313|EMBL:AFL50466.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
Putative ABC transporter ATP-binding protein YurJ n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3L0_RHIFR rbh
SCNpilot_cont_500_bf_scaffold_5739_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4178..5863
DNA (1686bp) protein (562aa)
dhaK2; dihydroxyacetone kinase DhaK (EC:2.7.1.29) rbh
Dihydroxyacetone kinase DhaK {ECO:0000313|EMBL:AFL50465.1}; EC=2.7.1.29 {ECO:0000313|EMBL:AFL50465.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
Dihydroxyacetone kinase DhaK n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3K9_RHIFR rbh
SCNpilot_cont_500_bf_scaffold_5739_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5872..6264)
DNA (393bp) protein (131aa)
Transposase, IS4 family protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MPY7_9SPHN
Transposase {ECO:0000313|EMBL:KIZ42055.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transposase
SCNpilot_cont_500_bf_scaffold_5739_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6276..6704)
DNA (429bp) protein (143aa)
IS298 transposase OrfA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CK19_9RHIZ
IS298 transposase OrfA {ECO:0000313|EMBL:EYR79798.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transposase for insertion sequence element
Displaying 7 items

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