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SCNpilot_cont_500_bf_scaffold_5927

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_5927_1
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..400)
DNA (399bp) protein (133aa)
ABC transporter-like protein; K09972 general L-amino acid transport system ATP-binding protein [EC:3.6.3.-]
PREDICTED: sulfate/thiosulfate import ATP-binding protein cysA-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C131B4
General L-amino acid transport ATP-binding protein AapP {ECO:0000313|EMBL:EKS39992.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_5927_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(412..1875)
DNA (1464bp) protein (488aa)
Amino acid ABC transporter membrane protein 2, PAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLN1_NITHX
amino acid ABC transporter permease; K09971 general L-amino acid transport system permease protein
Amino acid ABC transporter membrane protein 2, PAAT family {ECO:0000313|EMBL:ABE62866.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_5927_3
unknown

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2019..2183
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_5927_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3074..4090)
DNA (1017bp) protein (339aa)
Lysine-arginine-ornithine-binding periplasmic protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214T7_RHOPB
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ34081.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
lysine-arginine-ornithine-binding periplasmic protein; K09969 general L-amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_5927_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4417..5613
DNA (1197bp) protein (399aa)
cystathionine beta-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8] rbh
Cystathionine beta-lyase {ECO:0000313|EMBL:ABD07615.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ABD07615.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Cystathionine beta-lyase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVZ5_RHOP2 rbh
SCNpilot_cont_500_bf_scaffold_5927_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5922..7616
DNA (1695bp) protein (565aa)
Na/Pi cotransporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035FA317
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU42856.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K03324 phosphate:Na+ symporter rbh
SCNpilot_cont_500_bf_scaffold_5927_7
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7763..8089)
DNA (327bp) protein (109aa)
Lipid A biosynthesis n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSE9_NITWN
lipid A biosynthesis
Lipid A biosynthesis {ECO:0000313|EMBL:ABA04792.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_5927_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8082..8441)
DNA (360bp) protein (120aa)
dolichol-phosphate mannosyltransferase n=1 Tax=Afipia birgiae RepID=UPI0002E1DBFF
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABE62872.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 8 items

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