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SCNpilot_cont_500_bf_scaffold_14161

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_14161_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..786
DNA (786bp) protein (262aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Tryptophan--tRNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS83_NITHX
SCNpilot_cont_500_bf_scaffold_14161_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1013..1507
DNA (495bp) protein (165aa)
Universal stress protein UspA-like protein n=2 Tax=Bradyrhizobiaceae RepID=F7QI97_9BRAD
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EGP08988.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_14161_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1659..2228
DNA (570bp) protein (190aa)
Nitrogen-fixing NifU-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21C48_RHOPB rbh
Iron transporter {ECO:0000313|EMBL:KIZ40712.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
nitrogen-fixing NifU-like protein rbh
SCNpilot_cont_500_bf_scaffold_14161_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2334..3017
DNA (684bp) protein (228aa)
peptidase M22, glycoprotease; K14742 hypothetical protease [EC:3.4.-.-]
Peptidase M22, glycoprotease n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS77_NITHX
Peptidase M22, glycoprotease {ECO:0000313|EMBL:ABE60920.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_14161_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3014..3472
DNA (459bp) protein (153aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128); K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128]
alanine acetyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002E821FC
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:ERF84577.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_14161_6
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3460..3909
DNA (450bp) protein (150aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W2T2_9BRAD
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:EJN12947.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
fur; ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_cont_500_bf_scaffold_14161_7
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4031..4714
DNA (684bp) protein (228aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y6G7_9BRAD rbh
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:EHQ99551.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_14161_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4827..5123
DNA (297bp) protein (99aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palus
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG92_RHOPX
RNA modification protein, MiaB family; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
Displaying 8 items

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