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SCNpilot_cont_500_bf_scaffold_7228

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7228_1
unknown

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1..75
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7228_2
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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428..1408
DNA (981bp) protein (327aa)
Putative peptidase S49 family signal peptide peptidase SppA {ECO:0000313|EMBL:CCE00574.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCE00574.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
S49 family peptidase (EC:3.4.21.-); K04773 protease IV [EC:3.4.21.-]
Putative peptidase S49 family signal peptide peptidase SppA n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T297_9BRAD
SCNpilot_cont_500_bf_scaffold_7228_3
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1599..1913
DNA (315bp) protein (105aa)
Integration host factor subunit beta n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=IHFB_BRASO
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta
Integration host factor subunit beta {ECO:0000255|HAMAP-Rule:MF_00381}; Short=IHF-beta {ECO:0000255|HAMAP-Rule:MF_00381};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_500_bf_scaffold_7228_4
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2058..2447
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRZ5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC47529.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7228_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2527..3204
DNA (678bp) protein (226aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HI59_9BRAD rbh
N-(5'-phosphoribosyl)anthranilate isomerase rbh
SCNpilot_cont_500_bf_scaffold_7228_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3325..4503
DNA (1179bp) protein (393aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20]
Tryptophan synthase beta chain n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS33_NITHX
SCNpilot_cont_500_bf_scaffold_7228_7
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4500..5336
DNA (837bp) protein (279aa)
trpA; tryptophan synthase alpha chain; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] rbh
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
Tryptophan synthase alpha chain n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0FXS8_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_7228_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5534..6481
DNA (948bp) protein (316aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2]
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H415_9BRAD
SCNpilot_cont_500_bf_scaffold_7228_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6478..7815
DNA (1338bp) protein (446aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
FolC bifunctional protein {ECO:0000313|EMBL:ABE60961.1}; EC=6.3.2.17 {ECO:0000313|EMBL:ABE60961.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
FolC bifunctional protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QS36_NITHX
SCNpilot_cont_500_bf_scaffold_7228_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7958..8281)
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Oligotropha carboxidovorans RepID=B6JCP6_OLICO
trxA1; thioredoxin TrxA; K03671 thioredoxin 1
Thioredoxin TrxA {ECO:0000313|EMBL:AEI04787.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_7228_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8328..11795)
DNA (3468bp) protein (1156aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
Bll0752 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89WD8_BRADU
helicase 2
SCNpilot_cont_500_bf_scaffold_7228_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11792..12172)
DNA (381bp) protein (127aa)
Double-strand break repair protein AddB n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H421_9BRAD
Recombinase RecB {ECO:0000313|EMBL:KIZ42531.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
putative helicase-exonuclease type V protein family, AddB subunit
Displaying 12 items

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