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SCNpilot_cont_500_bf_scaffold_7237

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7237_1
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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114..896
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZVV2_9BRAD rbh
enoyl-CoA hydratase rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAM90470.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_7237_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(926..2485)
DNA (1560bp) protein (520aa)
Possible methylmalonyl-CoA decarboxylase alpha chain n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N484_RHOPA rbh
methylmalonyl-CoA decarboxylase subunit alpha rbh
Possible methylmalonyl-CoA decarboxylase alpha chain {ECO:0000313|EMBL:CAE28896.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_500_bf_scaffold_7237_3
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2626..3285)
DNA (660bp) protein (220aa)
DNA polymerase III subunit chi n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I9T0_9BRAD
transcriptional regulator
DNA polymerase III subunit chi {ECO:0000313|EMBL:ERF80280.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_7237_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3577..3798
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PMB1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS42726.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
biotin/lipoyl attachment domain-containing protein
SCNpilot_cont_500_bf_scaffold_7237_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4142..5299
DNA (1158bp) protein (386aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037FC889
TRAP dicarboxylate family transporter subunit DctP
Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein {ECO:0000313|EMBL:CAE28899.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_500_bf_scaffold_7237_6
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5394..7484
DNA (2091bp) protein (697aa)
Bll3936 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89NA6_BRADU rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ69485.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_500_bf_scaffold_7237_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7497..8225)
DNA (729bp) protein (243aa)
CoA-binding n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IY97_RHOP2
CoA-binding
CoA-binding {ECO:0000313|EMBL:ABD06813.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_500_bf_scaffold_7237_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8225..9493)
DNA (1269bp) protein (423aa)
CoA-binding n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q134F3_RHOPS
CoA-binding protein {ECO:0000313|EMBL:KIZ39649.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
CoA-binding protein
SCNpilot_cont_500_bf_scaffold_7237_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9533..10699)
DNA (1167bp) protein (389aa)
acyl-CoA dehydrogenase (EC:1.3.99.3); K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FEBFD6 rbh
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43196.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_cont_500_bf_scaffold_7237_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10721..11920)
DNA (1200bp) protein (400aa)
acetyl-CoA acetyltransferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036988D9
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43197.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7237_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12092..12523)
DNA (432bp) protein (144aa)
AMP-dependent synthetase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B5AB1
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43199.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
AMP-dependent synthetase and ligase
SCNpilot_cont_500_bf_scaffold_7237_12
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12504..13517)
DNA (1014bp) protein (338aa)
Long-chain acyl-CoA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I9T8_9BRAD
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:ERF80290.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
AMP-dependent synthetase and ligase
SCNpilot_cont_500_bf_scaffold_7237_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13545..14597)
DNA (1053bp) protein (351aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CAE28907.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CAE28907.1};; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
3-ketoacyl-CoA thiolase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N474_RHOPA
Displaying 13 items

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