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SCNpilot_cont_500_bf_scaffold_7250

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7250_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1..294)
DNA (294bp) protein (98aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=14625074 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
Tax=CSP1_6_Rokubacteria
SCNpilot_cont_500_bf_scaffold_7250_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(302..1174)
DNA (873bp) protein (291aa)
Possible branched-chain amino acid transport system substrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9X1_RHOPA
branched chain amino-acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCNpilot_cont_500_bf_scaffold_7250_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1593..1982)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWV7_AZOBR
Acyl dehydratase {ECO:0000313|EMBL:AIB15895.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7250_4
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1979..2362)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZG3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ02444.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7250_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2363..2761)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWV5_AZOBR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCNpilot_cont_500_bf_scaffold_7250_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2765..3919)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=3 Tax=Bordetella bronchiseptica RepID=K0MYH9_BORBM
Uncharacterized protein {ECO:0000313|EMBL:AIB15898.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_7250_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3922..4224)
DNA (303bp) protein (101aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002378507
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_cont_500_bf_scaffold_7250_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4190..4657)
DNA (468bp) protein (156aa)
enoyl-CoA hydratase (EC:4.2.1.17); K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Probable enoyl-CoA hydratase {ECO:0000313|EMBL:CCN25266.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCN25266.1};; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
Probable enoyl-CoA hydratase n=3 Tax=Bordetella bronchiseptica RepID=K4QQK1_BORBO
SCNpilot_cont_500_bf_scaffold_7250_9
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4654..5796)
DNA (1143bp) protein (381aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Probable acyl-CoA dehydrogenase n=2 Tax=Bordetella bronchiseptica RepID=K4QPL7_BORBO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_7250_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6070..7167
DNA (1098bp) protein (366aa)
acyl-CoA dehydrogenase domain protein; K00257 [EC:1.3.99.-]
Butyryl-CoA dehydrogenase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZF7_9RHOB
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_cont_500_bf_scaffold_7250_11
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7281..8207)
DNA (927bp) protein (309aa)
Two-component response regulator n=2 Tax=Bradyrhizobiaceae RepID=F7QKA1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS31966.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
LuxR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_7250_12
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8197..9918)
DNA (1722bp) protein (574aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VS9_BRADU
two-component hybrid sensor and regulator
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:BAR56635.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
Displaying 12 items

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