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SCNpilot_cont_500_bf_scaffold_7865

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_7865_1
unknown

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comp(3..80)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_7865_2
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(160..951)
DNA (792bp) protein (264aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
UPI0003CF2CCF related cluster n=1 Tax=unknown RepID=UPI0003CF2CCF rbh
glutamate racemase rbh
SCNpilot_cont_500_bf_scaffold_7865_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(944..1786)
DNA (843bp) protein (281aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
RNA methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A95E2
TrmH family RNA methyltransferase
SCNpilot_cont_500_bf_scaffold_7865_4
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1875..2765)
DNA (891bp) protein (297aa)
Alpha/beta fold family hydrolase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MPP7_9RHOB
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:EFL89007.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
epoxide hydrolase
SCNpilot_cont_500_bf_scaffold_7865_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2980..4110
DNA (1131bp) protein (377aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NQ2_RHILO
SCNpilot_cont_500_bf_scaffold_7865_6
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4346..5062
DNA (717bp) protein (239aa)
Aquaporin Z n=1 Tax=Rhizobium sp. CF080 RepID=J2I4U7_9RHIZ
Porin {ECO:0000313|EMBL:EZQ15372.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
aqpZ; aquaporin Z; K06188 aquaporin Z
SCNpilot_cont_500_bf_scaffold_7865_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5129..6292)
DNA (1164bp) protein (388aa)
amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HU09_9RHIZ rbh
Amidohydrolase {ECO:0000313|EMBL:EHK55769.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_7865_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6637..7113
DNA (477bp) protein (159aa)
UPI0003CE8509 related cluster n=1 Tax=unknown RepID=UPI0003CE8509
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6
SCNpilot_cont_500_bf_scaffold_7865_9
Mesorhizobium sp. LSJC277A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7113..7361
DNA (249bp) protein (83aa)
30S ribosomal protein S18 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FF528A
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
SCNpilot_cont_500_bf_scaffold_7865_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7570..8175
DNA (606bp) protein (202aa)
PREDICTED: 50S ribosomal protein L9, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16E1A
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9
SCNpilot_cont_500_bf_scaffold_7865_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8310..9158
DNA (849bp) protein (283aa)
UPI0003CEC288 related cluster n=1 Tax=unknown RepID=UPI0003CEC288
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDX19181.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
methyltransferase, cyclopropane fatty acid synthase
Displaying 11 items

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