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SCNpilot_cont_500_bf_scaffold_2136

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2136_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..395)
DNA (393bp) protein (131aa)
UPI0003CDE492 related cluster n=1 Tax=unknown RepID=UPI0003CDE492
Glycosyl transferase family 2 {ECO:0000313|EMBL:ESY69792.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
putative glycosyl transferase, family 2
SCNpilot_cont_500_bf_scaffold_2136_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(854..2071)
DNA (1218bp) protein (406aa)
Major facilitator transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU4_9RHIZ rbh
MFS transporter {ECO:0000313|EMBL:KKB84388.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Major facilitator superfamily (MFS) transporter rbh
SCNpilot_cont_500_bf_scaffold_2136_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2235..4106)
DNA (1872bp) protein (624aa)
Glycoside hydrolase, family 15 n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0X6_9BRAD rbh
Glycoside hydrolase, family 15 {ECO:0000313|EMBL:EAQ34111.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
glucoamylase rbh
SCNpilot_cont_500_bf_scaffold_2136_4
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4342..7623
DNA (3282bp) protein (1094aa)
trehalose synthase; K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16] rbh
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003683340 rbh
Trehalose synthase {ECO:0000313|EMBL:ABN76220.1}; TaxID=349101 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9).;"
SCNpilot_cont_500_bf_scaffold_2136_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7648..8802
DNA (1155bp) protein (385aa)
hippurate hydrolase; K01295 glutamate carboxypeptidase [EC:3.4.17.11]
Hippurate hydrolase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JK47_AGRRK
Peptidase M20 family protein {ECO:0000313|EMBL:GAJ93285.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_500_bf_scaffold_2136_6
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8866..9567
DNA (702bp) protein (234aa)
UPI0003CF1013 related cluster n=1 Tax=unknown RepID=UPI0003CF1013
Uncharacterized protein {ECO:0000313|EMBL:KDB05089.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_2136_7

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comp(9576..10622)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036C890D rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48894.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative Metallo-hydrolase/oxidoreductase superfamily protein; Beta-lactamase-like rbh
SCNpilot_cont_500_bf_scaffold_2136_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10814..12061
DNA (1248bp) protein (416aa)
UPI0003CDDCA2 related cluster n=1 Tax=unknown RepID=UPI0003CDDCA2
MFS transporter {ECO:0000313|EMBL:ESW88843.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_2136_9
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12168..13292
DNA (1125bp) protein (375aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
glutathione dependent formaldehyde dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] rbh
UPI0003CF933B related cluster n=1 Tax=unknown RepID=UPI0003CF933B rbh
SCNpilot_cont_500_bf_scaffold_2136_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13403..14224)
DNA (822bp) protein (274aa)
Acetate operon repressor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVC7_RHITR
acetate operon repressor
Acetate operon repressor {ECO:0000313|EMBL:AGB74099.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_2136_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14409..16115
DNA (1707bp) protein (569aa)
Glyoxylate carboligase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UX71_9RHIZ
Glyoxylate carboligase {ECO:0000313|EMBL:ENN85351.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
gcl; glyoxylate carboligase
SCNpilot_cont_500_bf_scaffold_2136_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16207..16998
DNA (792bp) protein (264aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hyi; hydroxypyruvate isomerase Hyi (EC:5.3.1.22)
Hydroxypyruvate isomerase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUI5_9RHIZ
SCNpilot_cont_500_bf_scaffold_2136_13
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17052..17180
DNA (129bp) protein (43aa)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KJH1_9RHIZ
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EMG54999.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
Displaying 13 items

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