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SCNpilot_cont_500_bf_scaffold_2178

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2178_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(97..1398)
DNA (1302bp) protein (434aa)
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
ATP synthase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000255|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000255|HAMAP-Rule:MF_01347}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
ATP synthase subunit beta n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=ATPB_MESSB
SCNpilot_cont_500_bf_scaffold_2178_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1424..2506)
DNA (1083bp) protein (361aa)
ATP synthase F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKD3_9RHIZ
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_2178_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2529..3740)
DNA (1212bp) protein (404aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
F0F1 ATP synthase subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Nitratireductor indicus C115 RepID=K2PLA2_9RHIZ
SCNpilot_cont_500_bf_scaffold_2178_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3974..4534)
DNA (561bp) protein (187aa)
ATP synthase F1 subunit delta; K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
UPI0003CE21FB related cluster n=1 Tax=unknown RepID=UPI0003CE21FB
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_500_bf_scaffold_2178_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4711..5106)
DNA (396bp) protein (132aa)
UPI0003CEAD81 related cluster n=1 Tax=unknown RepID=UPI0003CEAD81
Membrane protein {ECO:0000313|EMBL:ESW82000.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2178_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5390..6781
DNA (1392bp) protein (464aa)
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003641AC7
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS21595.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_500_bf_scaffold_2178_7
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6792..7739)
DNA (948bp) protein (316aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K01501 nitrilase [EC:3.5.5.1] rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKP2_SYNFM rbh
Nitrilase {ECO:0000313|EMBL:KGY25260.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCNpilot_cont_500_bf_scaffold_2178_8
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7955..8737
DNA (783bp) protein (261aa)
glutamine transport ATP-binding protein GlnQ 4; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] rbh
UPI0003CEA3F2 related cluster n=1 Tax=unknown RepID=UPI0003CEA3F2 rbh
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:ESY88252.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_2178_9
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8788..9588
DNA (801bp) protein (267aa)
UPI0003CE3270 related cluster n=1 Tax=unknown RepID=UPI0003CE3270 rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY81052.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
extracellular solute-binding protein, family 3 family protein 7 rbh
SCNpilot_cont_500_bf_scaffold_2178_10
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9687..10382
DNA (696bp) protein (232aa)
UPI0003CEDF53 related cluster n=2 Tax=unknown RepID=UPI0003CEDF53 rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESY81051.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2178_11
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10346..11071
DNA (726bp) protein (242aa)
UPI0003CEB826 related cluster n=1 Tax=unknown RepID=UPI0003CEB826 rbh
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESY88249.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
amino ABC transporter permease, 3-TM region, His/Glu/Gln/Arg/opine family domain-containing protein 14; K02029 polar amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2178_12
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11088..12335)
DNA (1248bp) protein (416aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
UPI0003CDFA86 related cluster n=1 Tax=unknown RepID=UPI0003CDFA86 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESY88246.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCNpilot_cont_500_bf_scaffold_2178_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12382..14562)
DNA (2181bp) protein (727aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
primosome assembly protein PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] rbh
Primosome assembly protein PriA n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLK1_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_2178_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14651..15304
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transaldolase; K00616 transaldolase [EC:2.2.1.2]
PREDICTED: uncharacterized protein LOC102334060 n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10F4E rbh
SCNpilot_cont_500_bf_scaffold_2178_15
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15311..16126
DNA (816bp) protein (272aa)
hydratase/decarboxylase; K01617 4-oxalocrotonate decarboxylase [EC:4.1.1.77]
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P846_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35800.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_2178_16
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16136..17047)
DNA (912bp) protein (304aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DE2_MESSB
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:ABG64583.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_2178_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17168..17734)
DNA (567bp) protein (189aa)
UPI0003D04FF7 related cluster n=1 Tax=unknown RepID=UPI0003D04FF7
Uncharacterized protein {ECO:0000313|EMBL:ESZ18716.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
putative secreted (periplasmic) protein
SCNpilot_cont_500_bf_scaffold_2178_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17721..19520)
DNA (1800bp) protein (600aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
PREDICTED: leucine--tRNA ligase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C17542
Displaying 18 items

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