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SCNpilot_cont_500_bf_scaffold_2316

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2316_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..733
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000373EEEE
Uncharacterized protein {ECO:0000313|EMBL:CDX20813.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2316_trna_1
unknown

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comp(858..939)
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_2316_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(990..1610)
DNA (621bp) protein (207aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phylloba
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=GPMA_RHILO
SCNpilot_cont_500_bf_scaffold_2316_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1641..2441)
DNA (801bp) protein (267aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
dihydrodipicolinate reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003651058
SCNpilot_cont_500_bf_scaffold_2316_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2380..4137)
DNA (1758bp) protein (586aa)
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJC8_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHK59174.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_500_bf_scaffold_2316_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4373..5401)
DNA (1029bp) protein (343aa)
glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2]
glucokinase n=1 Tax=Rhizobium loti RepID=UPI000377EDCB
Glucokinase {ECO:0000313|EMBL:AID33568.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2316_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5588..6598)
DNA (1011bp) protein (337aa)
peptidase U6 penicillin-insensitive murein endopeptidase; K07261 penicillin-insensitive murein endopeptidase [EC:3.4.24.-]
Penicillin-insensitive murein endopeptidase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BWK4_9RHIZ
Penicillin-insensitive murein endopeptidase {ECO:0000313|EMBL:CDX37434.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_500_bf_scaffold_2316_7
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6734..7258)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NIT7_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF20721.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2316_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7440..8330)
DNA (891bp) protein (297aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WGM7_9RHIZ
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CDX37439.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2316_9
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8327..9505)
DNA (1179bp) protein (393aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Epoxyqueuosine reductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CA8_MESSB
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2316_10
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9486..10178)
DNA (693bp) protein (231aa)
Glutathione S-transferase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KD52_MESAW
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:ESZ00841.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_cont_500_bf_scaffold_2316_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10349..11155
DNA (807bp) protein (269aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Undecaprenyl-diphosphatase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TFP8_MESCW
SCNpilot_cont_500_bf_scaffold_2316_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11170..12144)
DNA (975bp) protein (325aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGY7_9RHIZ
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex {ECO:0000313|EMBL:CCV03535.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCNpilot_cont_500_bf_scaffold_2316_13
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12260..14548)
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GEI9_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ45610.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
ybiO2; MscS family protein YbiO
SCNpilot_cont_500_bf_scaffold_2316_14
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14545..15726)
DNA (1182bp) protein (394aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GCM6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ44020.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
SCNpilot_cont_500_bf_scaffold_2316_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15905..16636)
DNA (732bp) protein (244aa)
30S ribosomal protein S1 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98CC3_RHILO
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
Displaying 16 items

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