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SCNpilot_cont_500_bf_scaffold_2716

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2716_1
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..337)
DNA (336bp) protein (112aa)
methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
Methionine synthase II (Cobalamin-independent) n=1 Tax=Rhizobium sp. CF080 RepID=J3CAE5_9RHIZ
Methionine synthase {ECO:0000313|EMBL:KGE01059.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
SCNpilot_cont_500_bf_scaffold_2716_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

488..1174
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BA9_MESSB rbh
hypothetical protein; K09988 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABG65316.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_2716_3
Mesorhizobium sp. L2C067A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1217..1849
DNA (633bp) protein (211aa)
Nucleoside triphosphate hydrolase n=2 Tax=Mesorhizobium RepID=V7FVF7_9RHIZ
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:ESZ31516.1}; TaxID=1287106 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C067A000.;"
ATPase AAA
SCNpilot_cont_500_bf_scaffold_2716_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2709..3479)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKJ8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58696.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3562..4155)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5W1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12889.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4184..4555)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A742_STAND
Uncharacterized protein {ECO:0000313|EMBL:KFL27393.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4788..5156
DNA (369bp) protein (123aa)
UPI0003CFA10D related cluster n=1 Tax=unknown RepID=UPI0003CFA10D
Uncharacterized protein {ECO:0000313|EMBL:ESZ13591.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5167..5820)
DNA (654bp) protein (218aa)
Integral membrane protein TerC n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QKR0_RHOPT
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:ACF03157.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_500_bf_scaffold_2716_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6225..7640
DNA (1416bp) protein (472aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2V4L2_9RHIZ
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:EJN00542.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7672..8289
DNA (618bp) protein (206aa)
3''''-5'''' exonuclease n=1 Tax=Hoeflea sp. 108 RepID=UPI000379D3F4
3'-5' exonuclease {ECO:0000313|EMBL:CDX20216.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ribonuclease D
SCNpilot_cont_500_bf_scaffold_2716_11
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8306..9013)
DNA (708bp) protein (236aa)
ABC transporter n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSJ6_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EIM72548.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2716_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9006..9752)
DNA (747bp) protein (249aa)
UPI0003CE9088 related cluster n=1 Tax=unknown RepID=UPI0003CE9088
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX18174.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC-type branched-chain amino acid transport systems, ATPase component
SCNpilot_cont_500_bf_scaffold_2716_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9740..10156)
DNA (417bp) protein (139aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ87_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EHK59207.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2716_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10271..10705)
DNA (435bp) protein (145aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAC1_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EHH11434.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2716_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10717..11598)
DNA (882bp) protein (294aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ86_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EHK59206.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2716_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11655..12614)
DNA (960bp) protein (320aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ85_9RHIZ rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EHK59205.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
branched chain amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_2716_17
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13069..14514)
DNA (1446bp) protein (482aa)
UPI0003CE0E60 related cluster n=1 Tax=unknown RepID=UPI0003CE0E60
Uncharacterized protein {ECO:0000313|EMBL:ESW85452.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_18
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14674..15057
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3C8G9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN00599.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
SCNpilot_cont_500_bf_scaffold_2716_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15192..15704
DNA (513bp) protein (171aa)
Nuclear export factor GLE1 n=3 Tax=Mesorhizobium RepID=V7G4H8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX20252.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15841..17649
DNA (1809bp) protein (603aa)
UPI0003CFC6DE related cluster n=1 Tax=unknown RepID=UPI0003CFC6DE
Putative copper resistance protein D {ECO:0000313|EMBL:CDX39206.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
copper resistance protein CopC; K14166 copper transport protein
SCNpilot_cont_500_bf_scaffold_2716_21
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17719..18624
DNA (906bp) protein (302aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
uroporphyrin-III C/tetrapyrrole methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
16S rRNA methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C034F rbh
SCNpilot_cont_500_bf_scaffold_2716_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18614..18991
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJY9_9RHIZ
UPF0102 protein X759_12815 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein; K07460 putative endonuclease
SCNpilot_cont_500_bf_scaffold_2716_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19102..19800)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P0B0_9BRAD
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:CDX39848.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_2716_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19843..21549)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DDE7_BRAJP
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:CDX39850.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2716_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21563..22438)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NRY0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX39852.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
livH3; ABC transporter, putative high-affinity branched-chain amino acid transport permease LivH; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_2716_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22601..23965)
DNA (1365bp) protein (455aa)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein n=2 Tax=Bradyrhizobiaceae RepID=F7QJZ7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CDX39856.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
twin-arginine translocation pathway signal
SCNpilot_cont_500_bf_scaffold_2716_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24203..24388)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI0003719389
Uncharacterized protein {ECO:0000313|EMBL:AID30337.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2716_28
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24554..27133)
DNA (2580bp) protein (860aa)
UPI0003CFD66B related cluster n=1 Tax=unknown RepID=UPI0003CFD66B
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
translation initiation factor IF-2; K02519 translation initiation factor IF-2
SCNpilot_cont_500_bf_scaffold_2716_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27130..27798)
DNA (669bp) protein (223aa)
UPI0003D007CB related cluster n=1 Tax=unknown RepID=UPI0003D007CB
Uncharacterized protein {ECO:0000313|EMBL:CDX22902.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K07742 hypothetical protein
SCNpilot_cont_500_bf_scaffold_2716_30
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27851..28747)
DNA (897bp) protein (299aa)
transcription elongation factor NusA n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000363AA6C
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcription termination factor NusA; K02600 N utilization substance protein A
Displaying 30 items

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