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SCNpilot_cont_500_bf_scaffold_2855

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2855_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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65..964
DNA (900bp) protein (300aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
5,10-methylene-tetrahydrofolate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBB6AF
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_2855_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1019..1981
DNA (963bp) protein (321aa)
Transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXP3_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EHK54520.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SCNpilot_cont_500_bf_scaffold_2855_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2030..3076
DNA (1047bp) protein (349aa)
Transcriptional regulator GntR n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTW1_9RHIZ rbh
Transcriptional regulator GntR {ECO:0000313|EMBL:EHK55848.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LacI family transcriptional regulator; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
SCNpilot_cont_500_bf_scaffold_2855_4
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3256..4377
DNA (1122bp) protein (374aa)
Putative sugar ABC transporter, substrate binding protein ribose ABC transporter n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FEW6_9RHIZ
Putative sugar ABC transporter, substrate binding protein ribose ABC transporter {ECO:0000313|EMBL:CCV14901.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_2855_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4448..5995
DNA (1548bp) protein (516aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTV9_9RHIZ
ABC-type sugar transport system, ATPase component
SCNpilot_cont_500_bf_scaffold_2855_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5992..6972
DNA (981bp) protein (327aa)
UPI0003CFD7AD related cluster n=1 Tax=unknown RepID=UPI0003CFD7AD
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ20230.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
inner-membrane translocator
SCNpilot_cont_500_bf_scaffold_2855_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6969..7958
DNA (990bp) protein (330aa)
UPI0003CEC79E related cluster n=1 Tax=unknown RepID=UPI0003CEC79E rbh
Putative sugar ABC transporter, permease protein ribose ABC transporter rbsC-like {ECO:0000313|EMBL:CDX29846.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
inner-membrane translocator; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_2855_8
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7988..8902
DNA (915bp) protein (305aa)
Gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YC26_MESOW
Gluconolactonase {ECO:0000313|EMBL:GAN55424.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
SCNpilot_cont_500_bf_scaffold_2855_9
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8921..10288)
DNA (1368bp) protein (456aa)
cytochrome P450 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030FC727
Cytochrome P450 {ECO:0000313|EMBL:EXL02559.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cytochrome P450
SCNpilot_cont_500_bf_scaffold_2855_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10451..12100
DNA (1650bp) protein (550aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=1 Tax=Nitratireductor indicus C115 RepID=K2N9E6_9RHIZ
Displaying 10 items

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