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SCNpilot_cont_500_bf_scaffold_786

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_786_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..241)
DNA (240bp) protein (80aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0Z2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34409.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_500_bf_scaffold_786_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

687..1661
DNA (975bp) protein (325aa)
Peptide ABC transporter solute-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXM7_9RHIZ rbh
Peptide ABC transporter solute-binding protein {ECO:0000313|EMBL:EHK54504.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
peptide ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_786_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1734..2255
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXM6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54503.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tripartite AtP-independent periplasmic transporter subunit DctQ
SCNpilot_cont_500_bf_scaffold_786_4
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2265..3575
DNA (1311bp) protein (437aa)
TRAP C4-dicarboxylate transport (Dct) system permease DctM subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXM5_9RHIZ rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KJS19131.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
TRAP dicarboxylate transporter subunit DctM rbh
SCNpilot_cont_500_bf_scaffold_786_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3572..4510
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXM4_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54501.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_786_6
unknown

Not on your lists

4655..4846
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_786_7
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4943..5299
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037D7224
Photosystem reaction center subunit H {ECO:0000313|EMBL:KHJ52981.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
PRC-barrel domain-containing protein
SCNpilot_cont_500_bf_scaffold_786_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5516..6262)
DNA (747bp) protein (249aa)
phosphoadenosine phosphosulfate reductase; K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] rbh
Phosphoadenosine phosphosulfate reductase {ECO:0000255|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000255|HAMAP-Rule:MF_00063};; 3'-phosphoadenylylsulfate reductase {ECO:0000255|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000255|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000255|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000255|HAMAP-Rule:MF_00063}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativ
Phosphoadenosine phosphosulfate reductase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=CYSH_MESSB rbh
SCNpilot_cont_500_bf_scaffold_786_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6237..6923)
DNA (687bp) protein (229aa)
sulfite reductase (ferredoxin) (EC:1.8.7.1); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase (Ferredoxin) {ECO:0000313|EMBL:ACS56110.1}; EC=1.8.7.1 {ECO:0000313|EMBL:ACS56110.1};; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
sulfite reductase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003609E3D
SCNpilot_cont_500_bf_scaffold_786_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6946..8373)
DNA (1428bp) protein (476aa)
uroporphyrin-III C-methyltransferase; K02302 uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
UPI0003CFA314 related cluster n=1 Tax=unknown RepID=UPI0003CFA314
Siroheme synthase {ECO:0000313|EMBL:ESZ22199.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_500_bf_scaffold_786_11
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8611..9066
DNA (456bp) protein (152aa)
UPI0003CDF69D related cluster n=1 Tax=unknown RepID=UPI0003CDF69D
host attachment protein
Host attachment protein {ECO:0000313|EMBL:ESY77765.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
SCNpilot_cont_500_bf_scaffold_786_12
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9217..10056)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036FF096
Hydrolase {ECO:0000313|EMBL:KGM49222.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
hydrolase
SCNpilot_cont_500_bf_scaffold_786_13
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10053..11162)
DNA (1110bp) protein (370aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUD9_9RHOB rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDQ06843.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
putative amino acid or sugar ABC transport system, permease protein
SCNpilot_cont_500_bf_scaffold_786_14
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11159..12160)
DNA (1002bp) protein (334aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557985 rbh
ABC transporter permease {ECO:0000313|EMBL:KAJ02525.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_786_15
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12169..12897)
DNA (729bp) protein (243aa)
ABC transporter related protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N9_9RHOB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KAJ02526.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_786_16
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12894..13658)
DNA (765bp) protein (255aa)
h16_A2256; ABC transporter ATPase (EC:3.6.3.22); K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUE5_9RHOB
ABC transporter related protein {ECO:0000313|EMBL:EDQ06846.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
SCNpilot_cont_500_bf_scaffold_786_17
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13761..14957)
DNA (1197bp) protein (399aa)
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KEO53196.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein
SCNpilot_cont_500_bf_scaffold_786_18
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14992..16527)
DNA (1536bp) protein (512aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:AKI00014.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AKI00014.1};; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7G7Y0_9RHOB rbh
AMP-dependent synthetase and ligase
SCNpilot_cont_500_bf_scaffold_786_19
Thioclava sp. DT23-4, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16680..17234
DNA (555bp) protein (185aa)
Transcriptional regulator, LuxR family/sensory box protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KEO53195.1}; TaxID=1353528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. DT23-4.;"
LuxR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_786_20
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17263..18507)
DNA (1245bp) protein (415aa)
sphingosine-1-phosphate lyase; K01634 sphinganine-1-phosphate aldolase [EC:4.1.2.27]
Putative sphingosine-1-phosphate lyase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF80_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:KGF69049.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_cont_500_bf_scaffold_786_21
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18532..19257)
DNA (726bp) protein (242aa)
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XKV0_VARPD
transcriptional regulator, GntR family
Putative GntR transcriptional regulator {ECO:0000313|EMBL:CCM80266.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
SCNpilot_cont_500_bf_scaffold_786_22
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19375..20205
DNA (831bp) protein (277aa)
ABC transporter related protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAN5_FRASU
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADP82227.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_786_23
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20202..21023
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI0003737A68
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADP82226.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_786_24
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21037..22047
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JAN6_FRASU
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ADP82228.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_500_bf_scaffold_786_25
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22156..22938)
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitratireductor indicus C115 RepID=K2N9P5_9RHIZ
Protein FixR {ECO:0000313|EMBL:CDX24011.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_786_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23015..25195)
DNA (2181bp) protein (727aa)
UPI0003CDDC16 related cluster n=1 Tax=unknown RepID=UPI0003CDDC16
Penicillin-binding protein {ECO:0000313|EMBL:CDX33538.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
penicillin-binding protein
SCNpilot_cont_500_bf_scaffold_786_27
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25495..26103
DNA (609bp) protein (203aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89H52_BRADU
Transcriptional regulatory protein {ECO:0000313|EMBL:BAR54177.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_786_28
unknown

Not on your lists

26100..26369
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003647AF2
SCNpilot_cont_500_bf_scaffold_786_29
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26366..27793
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036CD9D3
Predicted protein {ECO:0000313|EMBL:EFL07786.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
SSS family transporter
SCNpilot_cont_500_bf_scaffold_786_30
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27804..28880
DNA (1077bp) protein (359aa)
adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4]
Adenosine deaminase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VFQ2_9PROT rbh
Adenosine deaminase {ECO:0000313|EMBL:GAA09197.1}; TaxID=749388 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis NBRC 101654.;"
Displaying items 1-30 of 37 in total

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