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SCNpilot_cont_500_bf_scaffold_829

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_829_1
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..565)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037E53E9
helix-turn-helix domain-containing protein
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABR64014.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_829_2
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(574..1644)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037E53E9
helix-turn-helix domain-containing protein
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ABR64014.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_500_bf_scaffold_829_3
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1903..2970)
DNA (1068bp) protein (356aa)
Transcriptional regulator, AraC family n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JYS0_MARM1
AraC family transcriptional regulator {ECO:0000313|EMBL:KJH80492.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
AraC family transcriptional regulator; K04033 AraC family transcriptional regulator, ethanolamine operon transcriptional activator
SCNpilot_cont_500_bf_scaffold_829_4
unknown

Not on your lists

comp(3641..3841)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_829_5
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3900..4640)
DNA (741bp) protein (247aa)
MgtC/SapB transporter n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X1P6_OCHA4
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
Methyltransferase {ECO:0000313|EMBL:ERI16195.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
SCNpilot_cont_500_bf_scaffold_829_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4862..5545)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FKI4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDP51373.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_829_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5642..7084)
DNA (1443bp) protein (481aa)
hydrolase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035D0AF7 rbh
Putative amidohydrolase {ECO:0000313|EMBL:EHH04137.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
putative amidohydrolase rbh
SCNpilot_cont_500_bf_scaffold_829_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7118..7327)
DNA (210bp) protein (70aa)
peptidase M14 n=1 Tax=Ochrobactrum anthropi RepID=UPI00028A2A1F
succinylglutamate desuccinylase/aspartoacylase; K06987
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:ABS15146.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_829_9
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7767..9209)
DNA (1443bp) protein (481aa)
amino acid APC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00038285D5
Transporter, basic amino acid/polyamine antiporter (APA) family {ECO:0000313|EMBL:EJJ28749.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
arginine/ornithine antiporter; K03758 arginine:ornithine antiporter
SCNpilot_cont_500_bf_scaffold_829_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9449..10882
DNA (1434bp) protein (478aa)
amino acid APC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000367C0F9 rbh
Transporter, basic amino acid/polyamine antiporter (APA) family {ECO:0000313|EMBL:EJJ28748.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
arginine/ornithine antiporter; K03758 arginine:ornithine antiporter rbh
SCNpilot_cont_500_bf_scaffold_829_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10902..12146
DNA (1245bp) protein (415aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
arginine deiminase (EC:3.5.3.6); K01478 arginine deiminase [EC:3.5.3.6]
arginine deiminase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FA56D
SCNpilot_cont_500_bf_scaffold_829_12
unknown

Not on your lists

12231..13289
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037EE235
Uncharacterized protein {ECO:0000313|EMBL:CPR19274.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_829_13
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13322..14965)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIK3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF73371.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_829_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15106..15651)
DNA (546bp) protein (182aa)
Mll6729 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988I5_RHILO
hypothetical protein
Mll6729 protein {ECO:0000313|EMBL:BAB52965.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_829_15
unknown

Not on your lists

15700..15978
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_829_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16284..17156)
DNA (873bp) protein (291aa)
Gluconolactonase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPE0_9SPHN
Gluconolactonase {ECO:0000313|EMBL:ENY80184.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_829_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17174..18406)
DNA (1233bp) protein (411aa)
Major facilitator superfamily transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JS40_9PROT rbh
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKE78283.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
major facilitator superfamily transporter
SCNpilot_cont_500_bf_scaffold_829_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18442..19485)
DNA (1044bp) protein (348aa)
Zinc-binding dehydrogenase family oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W938_9SPHN rbh
Zinc-binding dehydrogenase family oxidoreductase {ECO:0000313|EMBL:ENY80178.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
alcohol dehydrogenase
SCNpilot_cont_500_bf_scaffold_829_19
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19485..19904)
DNA (420bp) protein (140aa)
Uncharacterized protein id=3198521 bin=GWF2_Methylomirabilis_70_14 species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K07068
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_829_20
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19901..21040)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13I25_BURXL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE36264.1}; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia xenovorans (strain LB400).;"
SCNpilot_cont_500_bf_scaffold_829_21
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21070..22125)
DNA (1056bp) protein (352aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FED0_9DELT
Tax=CG_Delta_05
SCNpilot_cont_500_bf_scaffold_829_22
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22136..23767)
DNA (1632bp) protein (544aa)
AMP-dependent synthetase and ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
AMP-binding enzyme id=4177616 bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_829_23
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23764..24180)
DNA (417bp) protein (139aa)
Uncharacterized protein id=3198521 bin=GWF2_Methylomirabilis_70_14 species=Bordetella bronchiseptica genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_829_24
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24186..25346)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4T3R9_BORBO
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_829_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25356..26336)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXQ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49629.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
acetyl-CoA acetyltransferase-like protein
SCNpilot_cont_500_bf_scaffold_829_26
unknown

Not on your lists

comp(26336..26500)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_829_27
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26497..26931)
DNA (435bp) protein (145aa)
Putative small subunit of thiolase DitF n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAB9_HALMO
Putative small subunit of thiolase DitF {ECO:0000313|EMBL:EMA41345.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_829_28
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26971..28131)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036F855E
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_829_29
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28142..29344)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI000374DBE3
bile acid-inducible operon protein F
Tax=RBG_13_Deltaproteobacteria_58_19_curated
SCNpilot_cont_500_bf_scaffold_829_30
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29341..31128)
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003624A33 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ12022.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
binding-protein-dependent transport systems inner membrane component
Displaying items 1-30 of 56 in total

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