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SCNpilot_cont_500_bf_scaffold_1002

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1002_1
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15..1463)
DNA (1449bp) protein (483aa)
Hypothetical membrane-anchored protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AGG6_RHIFH rbh
hypothetical protein rbh
Hypothetical membrane-anchored protein {ECO:0000313|EMBL:CCF00148.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_1002_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1475..2272)
DNA (798bp) protein (266aa)
Putative glycosyl transferase involved in osmoadaptation (EC:2.7.8.6)
UDP-phosphate galactosephosphotransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HYK8_9RHIZ
UDP-phosphate galactosephosphotransferase {ECO:0000313|EMBL:EHK54164.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_1002_3
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2589..3962
DNA (1374bp) protein (458aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:ESY89005.1}; EC=5.4.3.8 {ECO:0000313|EMBL:ESY89005.1};; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hemL; putative aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
UPI0003CF6625 related cluster n=1 Tax=unknown RepID=UPI0003CF6625 rbh
SCNpilot_cont_500_bf_scaffold_1002_4
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3987..5141)
DNA (1155bp) protein (385aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003787C61
SCNpilot_cont_500_bf_scaffold_1002_5
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5141..5512)
DNA (372bp) protein (124aa)
Glycosyltransferase (EC:2.4.1.57)
Mannosyltransferase n=1 Tax=Bacteroides sp. D22 RepID=D7J8N5_9BACE
Mannosyltransferase {ECO:0000313|EMBL:EFI12085.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
SCNpilot_cont_500_bf_scaffold_1002_6
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5481..6332)
DNA (852bp) protein (284aa)
Glycosyl transferase, group 1 n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZPQ0_ACICS
glycosyl transferase family protein
Glycosyl transferase, group 1 {ECO:0000313|EMBL:AEK56860.1}; TaxID=990288 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus (strain SM-1).;"
SCNpilot_cont_500_bf_scaffold_1002_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6525..7709
DNA (1185bp) protein (395aa)
UPI0003CFDBBD related cluster n=1 Tax=unknown RepID=UPI0003CFDBBD rbh
Glycosyl transferase {ECO:0000313|EMBL:EXL09375.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
group 1 glycosyl transferase rbh
SCNpilot_cont_500_bf_scaffold_1002_8
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7667..8761)
DNA (1095bp) protein (365aa)
Putative glycosyl transferase (EC:2.4.1.21) rbh
UPI0003CE0A66 related cluster n=1 Tax=unknown RepID=UPI0003CE0A66 rbh
Glycosyl transferase {ECO:0000313|EMBL:ESY88991.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_500_bf_scaffold_1002_9
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8978..10054
DNA (1077bp) protein (359aa)
Glycosyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HYL1_9RHIZ rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:KEC79271.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
glycosyl transferase rbh
SCNpilot_cont_500_bf_scaffold_1002_10
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10051..11436
DNA (1386bp) protein (462aa)
Exopolysaccharide production protein ExoF2 n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KRX9_RHISN rbh
Exopolysaccharide production protein ExoF2 {ECO:0000313|EMBL:KEC79270.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
exoF2; exopolysaccharide production protein ExoF2 precursor; K01991 polysaccharide export outer membrane protein rbh
SCNpilot_cont_500_bf_scaffold_1002_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11582..13426
DNA (1845bp) protein (615aa)
EpsB protein {ECO:0000313|EMBL:CCF00130.1}; EC=2.7.10.- {ECO:0000313|EMBL:CCF00130.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Putative tyrosine-protein kinase epsB EPS I polysaccharide export protein epsB n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AGE8_RHIFH rbh
epsB; putative tyrosine-protein kinase epsB; EPS I polysaccharide export protein epsB rbh
SCNpilot_cont_500_bf_scaffold_1002_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13847..15286
DNA (1440bp) protein (480aa)
Conserved hypothetical membrane protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AGJ5_RHIFH rbh
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52247.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_1002_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15591..17426
DNA (1836bp) protein (612aa)
Sulfite reductase [NADPH] flavoprotein alpha-component {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00014038}; Short=SiR-FP {ECO:0000256|PIRNR:PIRNR000207};; EC=1.8.1.2 {ECO:0000256|PIRNR:PIRNR000207, ECO:0000256|SAAS:SAAS00013953};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sulfite reductase (NADPH) flavoprotein, alpha chain; K00380 sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
Sulfite reductase [NADPH] flavoprotein alpha-component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC8_NITHX
SCNpilot_cont_500_bf_scaffold_1002_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17439..19166
DNA (1728bp) protein (576aa)
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000256|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000256|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000256|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000256|HAMAP-Rule:MF_01540};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
sulfite reductase subunit beta; K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase [NADPH] hemoprotein beta-component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=CYSI_NITHX
SCNpilot_cont_500_bf_scaffold_1002_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19225..20091
DNA (867bp) protein (289aa)
cysA2; thiosulfate sulfurtransferase CysA (EC:2.8.1.1); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
Thiosulfate sulfurtransferase CysA {ECO:0000313|EMBL:AEI08067.1}; EC=2.8.1.1 {ECO:0000313|EMBL:AEI08067.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Thiosulfate sulfurtransferase CysA n=2 Tax=Oligotropha carboxidovorans RepID=B6JCW4_OLICO rbh
SCNpilot_cont_500_bf_scaffold_1002_16
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20151..21317
DNA (1167bp) protein (389aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:BAQ16597.1}; EC=2.5.1.48 {ECO:0000313|EMBL:BAQ16597.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48] rbh
MetC-like protein n=1 Tax=Azospirillum brasilense RepID=C5H0A4_AZOBR rbh
SCNpilot_cont_500_bf_scaffold_1002_17
bacterium YEK0313, Bacteria

Not on your lists

21705..22460
DNA (756bp) protein (252aa)
Putative short chain dehydrogenase n=5 Tax=Bordetella RepID=K0MA23_BORPB
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2 {ECO:0000313|EMBL:CEJ10994.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short chain dehydrogenase
SCNpilot_cont_500_bf_scaffold_1002_18
bacterium YEK0313, Bacteria

Not on your lists

22537..23301
DNA (765bp) protein (255aa)
Putative gluconate 5-dehydrogenase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A300_9PROT
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:CEJ10993.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_1002_19
bacterium YEK0313, Bacteria

Not on your lists

23352..23648
DNA (297bp) protein (99aa)
Stress responsive A/B barrel domain-containing protein 1 n=1 Tax=Achromobacter piechaudii HLE RepID=J4PA21_9BURK
Stress responsive A/B Barrel Domain protein {ECO:0000313|EMBL:CEJ10992.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
stress responsive A/B barrel domain-containing protein 1
SCNpilot_cont_500_bf_scaffold_1002_20
bacterium YEK0313, Bacteria

Not on your lists

23652..25565
DNA (1914bp) protein (638aa)
acetate--CoA ligase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] rbh
AMP-dependent synthetase and ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TX05_ALIDB rbh
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:CEJ10991.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_1002_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25587..26729)
DNA (1143bp) protein (381aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4Y0A6_ALCXX rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_1002_22
Pseudomonas sp. FeS53a, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26719..27864)
DNA (1146bp) protein (382aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KIV65664.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KIV65664.1};; TaxID=1604022 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FeS53a.;"
acyl-CoA dehydrogenase (EC:1.3.99.-)
acyl-CoA dehydrogenase n=1 Tax=Pseudomonas alcaliphila RepID=UPI00030C9748
SCNpilot_cont_500_bf_scaffold_1002_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(27914..28744)
DNA (831bp) protein (277aa)
RSp0035; enoyl-CoA hydratase (EC:4.2.1.17) rbh
Enoyl-CoA hydratase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UE99_9RHOB rbh
Tax=GWA2_Rokubacteria_73_35_curated
SCNpilot_cont_500_bf_scaffold_1002_24
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28770..29510)
DNA (741bp) protein (247aa)
alcohol dehydrogenase; K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] rbh
Putative alcohol dehydrogenase n=1 Tax=Thauera aromatica RepID=Q9AJT2_THAAR rbh
Tax=RBG_16_Gamma2_60_9_curated
SCNpilot_cont_500_bf_scaffold_1002_25
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29521..30273)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036D5FE4
enoyl-CoA hydratase
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCNpilot_cont_500_bf_scaffold_1002_26
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30429..31181)
DNA (753bp) protein (251aa)
Transcriptional regulator n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AGW7_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EME71819.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1002_27
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31178..31681)
DNA (504bp) protein (168aa)
Thioesterase family protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJG5_9PROT
Thioesterase family protein {ECO:0000313|EMBL:EFH12557.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
thioesterase superfamily protein
SCNpilot_cont_500_bf_scaffold_1002_28
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31703..32734)
DNA (1032bp) protein (344aa)
Quinone oxidoreductase (EC:1.6.5.5)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000303762B
NADPH:quinone oxidoreductase {ECO:0000313|EMBL:AGW89587.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
SCNpilot_cont_500_bf_scaffold_1002_29
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32743..33693)
DNA (951bp) protein (317aa)
o-succinylbenzoate--CoA ligase; K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-]
Cyclohexanecarboxylate-CoA ligase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IUL2_9BRAD
Cyclohexanecarboxylate-CoA ligase {ECO:0000313|EMBL:ERF86584.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_1002_30
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34427..35236)
DNA (810bp) protein (270aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:EKF43818.1}; EC=4.2.1.17 {ECO:0000313|EMBL:EKF43818.1};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GRF8_9PROT
Displaying items 1-30 of 69 in total

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