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SCNpilot_cont_500_bf_scaffold_1141

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1141_1
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..654)
DNA (654bp) protein (218aa)
periplasmic maltose-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037B0D00
Extracellular solute-binding protein {ECO:0000313|EMBL:EMG52339.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_1141_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(714..1892)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EE1BCB
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHK45772.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_1141_3
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2162..3127
DNA (966bp) protein (322aa)
UPI0003CE81BB related cluster n=1 Tax=unknown RepID=UPI0003CE81BB
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY74161.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1141_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3138..3752)
DNA (615bp) protein (205aa)
transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E0F3EA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13170.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
lysine exporter protein LysE/YggA
SCNpilot_cont_500_bf_scaffold_1141_5
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3765..4670)
DNA (906bp) protein (302aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D3ACF
Ribokinase {ECO:0000313|EMBL:ESY07874.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
SCNpilot_cont_500_bf_scaffold_1141_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5622)
DNA (882bp) protein (294aa)
O6-methylguanine-DNA methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
6-O-methylguanine-DNA methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031B42EA rbh
Methylated-DNA/protein-cysteinemethyltransferase {ECO:0000313|EMBL:CDX32530.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_500_bf_scaffold_1141_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5729..6214)
DNA (486bp) protein (162aa)
UPI0003D05D88 related cluster n=1 Tax=unknown RepID=UPI0003D05D88
Membrane protein {ECO:0000313|EMBL:ESZ22232.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1141_8
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6236..6985
DNA (750bp) protein (250aa)
endonuclease III; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
Endonuclease III n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6WVA3_OCHA4
SCNpilot_cont_500_bf_scaffold_1141_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6942..7688)
DNA (747bp) protein (249aa)
CysZ-like protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKK1_9RHIZ
CysZ-like protein {ECO:0000313|EMBL:EHK58699.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
CysZ-like protein; K06203 CysZ protein
SCNpilot_cont_500_bf_scaffold_1141_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7767..8228)
DNA (462bp) protein (154aa)
UPI0003CF29E8 related cluster n=1 Tax=unknown RepID=UPI0003CF29E8
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:CDX34037.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1141_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8225..8809)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MKP7_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF17817.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1141_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8802..9701)
DNA (900bp) protein (300aa)
UPI0003CF6609 related cluster n=1 Tax=unknown RepID=UPI0003CF6609
ApbE family lipoprotein {ECO:0000313|EMBL:CDX27054.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1141_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9701..11236)
DNA (1536bp) protein (512aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAB4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX27057.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1141_14
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11450..14413)
DNA (2964bp) protein (988aa)
aldehyde oxidoreductase (EC:1.2.3.1)
Aldehyde oxidase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F226_9RHIZ rbh
Aldehyde oxidase {ECO:0000313|EMBL:ESX25380.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
SCNpilot_cont_500_bf_scaffold_1141_15
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14410..15270)
DNA (861bp) protein (287aa)
Xanthine dehydrogenase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7GZF6_9RHIZ rbh
Xanthine dehydrogenase {ECO:0000313|EMBL:ESW78584.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein rbh
SCNpilot_cont_500_bf_scaffold_1141_16
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15404..16000
DNA (597bp) protein (199aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] rbh
Isochorismatase hydrolase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DE6_MESSB rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:ABG64579.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1141_17
unknown

Not on your lists

comp(15997..16200)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1141_18
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16370..16951
DNA (582bp) protein (194aa)
Conserved hypothetical membrane protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YES7_MOBAS
Conserved hypothetical membrane protein {ECO:0000313|EMBL:EAS48818.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1141_19
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16961..18076)
DNA (1116bp) protein (372aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
mtnA; methylthioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
UPI0003CE3FB7 related cluster n=1 Tax=unknown RepID=UPI0003CE3FB7
SCNpilot_cont_500_bf_scaffold_1141_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18157..19428)
DNA (1272bp) protein (424aa)
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
5-methylthioribose kinase (EC:2.7.1.100); K00899 5-methylthioribose kinase [EC:2.7.1.100]
Methylthioribose kinase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7L3_9RHIZ
SCNpilot_cont_500_bf_scaffold_1141_21
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19449..21500)
DNA (2052bp) protein (684aa)
UPI0003CED417 related cluster n=1 Tax=unknown RepID=UPI0003CED417 rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:ESY73200.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
class II aldolase/adducin family protein rbh
SCNpilot_cont_500_bf_scaffold_1141_22
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21602..22138)
DNA (537bp) protein (179aa)
Isochorismatase hydrolase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M088_METRJ
Isochorismatase {ECO:0000313|EMBL:KGJ08953.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
isochorismatase hydrolase
SCNpilot_cont_500_bf_scaffold_1141_23

Not on your lists

comp(22135..22791)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGN1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKN87098.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1141_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22882..24438
DNA (1557bp) protein (519aa)
gamma-aminobutyrate metabolism dehydratase/isomerase (EC:4.2.1.- 5.3.3.3); K00483 4-hydroxyphenylacetate-3-monooxygenase large chain [EC:1.14.14.9] rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ98_AFIFE rbh
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:KFG70576.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_500_bf_scaffold_1141_25
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24475..25146
DNA (672bp) protein (224aa)
DSBA oxidoreductase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CW41_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGF70334.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
nahD; DSBA oxidoreductase
SCNpilot_cont_500_bf_scaffold_1141_26
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25150..25839)
DNA (690bp) protein (230aa)
Glycerol metabolism activator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FDK7_9RHIZ
Glycerol metabolism activator {ECO:0000313|EMBL:CDX12409.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
two-component response regulator
SCNpilot_cont_500_bf_scaffold_1141_27
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25904..26731)
DNA (828bp) protein (276aa)
oxidoreductase FAD/NAD(P)-binding protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11CP0_MESSB
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:ABG64835.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1141_28
unknown

Not on your lists

comp(26867..27100)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1141_29
unknown

Not on your lists

comp(27242..27406)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1141_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27424..28887
DNA (1464bp) protein (488aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
5-oxoprolinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ52_9RHIZ
5-oxoprolinase {ECO:0000313|EMBL:EHK59244.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Displaying items 1-30 of 31 in total

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