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SCNpilot_cont_500_bf_scaffold_1214

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1214_1
unknown

Not on your lists

2..100
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1214_2
unknown

Not on your lists

100..312
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1214_3
unknown

Not on your lists

324..668
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1214_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

661..1005
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M4T3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF17096.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_500_bf_scaffold_1214_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

998..2164
DNA (1167bp) protein (389aa)
Phage Gp37Gp68 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SSB6_NITWN
Uncharacterized protein {ECO:0000313|EMBL:ETR75052.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
phage Gp37Gp68
SCNpilot_cont_500_bf_scaffold_1214_6
bacterium YEK0313, Bacteria

Not on your lists

2161..2325
DNA (165bp) protein (55aa)
UPI0003D0634F related cluster n=1 Tax=unknown RepID=UPI0003D0634F
Uncharacterized protein {ECO:0000313|EMBL:CEJ15987.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_1214_7
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2328..3212
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZT6_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH88150.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1214_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3209..3430
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N948_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44018.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_500_bf_scaffold_1214_9
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3390..4751)
DNA (1362bp) protein (454aa)
Phage integrase family protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X1D9_OCHA4
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABS15043.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_500_bf_scaffold_1214_trna_1
unknown

Not on your lists

comp(4901..4981)
DNA (81bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_1214_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5319..5459
DNA (141bp) protein (47aa)
Uncharacterized protein n=2 Tax=Nitratireductor RepID=I5C0H0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF41018.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1214_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5645..7066
DNA (1422bp) protein (474aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
tRNA (Uracil-5-)-methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG94_9RHIZ
tRNA:m(5)U-54 methyltransferase
SCNpilot_cont_500_bf_scaffold_1214_12
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7067..8839)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HD8_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG63187.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1214_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8910..9749)
DNA (840bp) protein (280aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWJ8_9RHIZ
Squalene/phytoene synthase {ECO:0000313|EMBL:CDX12258.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
phytoene/squalene synthetase
SCNpilot_cont_500_bf_scaffold_1214_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..10150)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD39_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10511.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K09008 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1214_15
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10147..11388)
DNA (1242bp) protein (414aa)
Protein translocase subunit secD n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11HD5_MESSB
bifunctional preprotein translocase subunit SecD/SecF; K12257 SecD/SecF fusion protein
Protein translocase subunit secD {ECO:0000313|EMBL:ABG63190.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1214_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11382..12614)
DNA (1233bp) protein (411aa)
Bifunctional preprotein translocase subunit SecD/SecF n=1 Tax=Nitratireductor indicus C115 RepID=K2N0H6_9RHIZ
Bifunctional preprotein translocase subunit SecD/SecF {ECO:0000313|EMBL:EKF41013.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
protein-export membrane protein, SecD/SecF family
SCNpilot_cont_500_bf_scaffold_1214_17
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12664..13005)
DNA (342bp) protein (114aa)
membrane protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E6B9C
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC
Membrane protein {ECO:0000313|EMBL:ESY85299.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_500_bf_scaffold_1214_18
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13162..14040
DNA (879bp) protein (293aa)
ATPase AAA n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG98_9RHIZ
ATPase AAA {ECO:0000313|EMBL:ESX73223.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
putative ATPase (AAA+ superfamily)
SCNpilot_cont_500_bf_scaffold_1214_19
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14126..15637)
DNA (1512bp) protein (504aa)
UPI0003CE3A0B related cluster n=1 Tax=unknown RepID=UPI0003CE3A0B
Peptigoglycan-binding protein LysM {ECO:0000313|EMBL:ESW80238.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
metalloendopeptidase-like membrane protein
SCNpilot_cont_500_bf_scaffold_1214_20
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15744..16397)
DNA (654bp) protein (218aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:EKF41009.1}; EC=2.1.1.77 {ECO:0000313|EMBL:EKF41009.1};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
protein-L-isoaspartate O-methyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003110420
SCNpilot_cont_500_bf_scaffold_1214_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16394..17152)
DNA (759bp) protein (253aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
surE; stationary phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HWK7_9RHIZ
SCNpilot_cont_500_bf_scaffold_1214_22
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17174..18472)
DNA (1299bp) protein (433aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
seryl-tRNA synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CCDA7
SCNpilot_cont_500_bf_scaffold_1214_23
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18802..19632)
DNA (831bp) protein (277aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. SJ98 RepID=K8RAB7_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EKS69867.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1214_24
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19793..20545
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JPB6_BURP8
hypothetical protein; K07090
Uncharacterized protein {ECO:0000313|EMBL:ACC73119.1}; Flags: Precursor;; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phymatum (strain DSM 17167 / STM815).;"
SCNpilot_cont_500_bf_scaffold_1214_25
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20581..22230)
DNA (1650bp) protein (550aa)
UPI0003CEAD6C related cluster n=1 Tax=unknown RepID=UPI0003CEAD6C rbh
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW88898.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ABC transporter rbh
SCNpilot_cont_500_bf_scaffold_1214_26
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22309..24225)
DNA (1917bp) protein (639aa)
Phenol 2-monooxygenase {ECO:0000313|EMBL:KGD87315.1}; EC=1.14.13.7 {ECO:0000313|EMBL:KGD87315.1};; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
phenol 2-monooxygenase; K03380 phenol 2-monooxygenase [EC:1.14.13.7]
Phenol 2-monooxygenase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3R9_9RHOB
SCNpilot_cont_500_bf_scaffold_1214_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24440..25879
DNA (1440bp) protein (480aa)
Putative transporter n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FBB0_9RHIZ
Putative transporter {ECO:0000313|EMBL:CCV14537.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_1214_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25907..26620)
DNA (714bp) protein (238aa)
Nitroreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT28_9RHIZ
Nitroreductase {ECO:0000313|EMBL:EHK56128.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
nitroreductase
SCNpilot_cont_500_bf_scaffold_1214_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26821..29274
DNA (2454bp) protein (818aa)
dimethylglycine dehydrogenase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
Dimethylglycine dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT30_9RHIZ
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:EHK56130.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Displaying items 1-30 of 35 in total

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