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SCNpilot_cont_500_bf_scaffold_1279

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1279_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..887
DNA (885bp) protein (295aa)
Fructose-1,6-bisphosphate aldolase {ECO:0000313|EMBL:EHK58257.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EHK58257.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] rbh
PREDICTED: fructose-bisphosphate aldolase, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18683
SCNpilot_cont_500_bf_scaffold_1279_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1274..1927
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQ63_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83230.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2018..3277)
DNA (1260bp) protein (420aa)
2-octaprenyl-6-methoxyphenyl hydroxylase; K03185 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11DB4_MESSB rbh
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:ABG64611.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1279_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3384..4262
DNA (879bp) protein (293aa)
Acyl-CoA thioesterase II n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LMX4_9RHIZ rbh
Acyl-CoA thioesterase II {ECO:0000313|EMBL:EKF19119.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
acyl-CoA thioesterase II
SCNpilot_cont_500_bf_scaffold_1279_5
unknown

Not on your lists

comp(4334..4594)
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1279_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4735..5733
DNA (999bp) protein (333aa)
Ammonium transporter AmtB n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98EH1_RHILO
ammonium transporter; K03320 ammonium transporter, Amt family
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1279_7
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5789..6856)
DNA (1068bp) protein (356aa)
UPI0003CF38EC related cluster n=1 Tax=unknown RepID=UPI0003CF38EC
Metallophosphoesterase {ECO:0000313|EMBL:ESX08661.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7466..10090
DNA (2625bp) protein (875aa)
cell division protein FtsK n=1 Tax=Hoeflea sp. 108 RepID=UPI0003729B5D
DNA translocase FtsK {ECO:0000313|EMBL:CDX52414.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_cont_500_bf_scaffold_1279_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10358..11023
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLB6_9RHIZ
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
outer membrane lipoprotein carrier protein LolA
SCNpilot_cont_500_bf_scaffold_1279_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11062..11886)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUG0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07665.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12049..12855
DNA (807bp) protein (269aa)
Exodeoxyribonuclease III n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLB7_9RHIZ
Exodeoxyribonuclease III {ECO:0000313|EMBL:EHK58446.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
exodeoxyribonuclease III Xth
SCNpilot_cont_500_bf_scaffold_1279_12
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12869..13327)
DNA (459bp) protein (153aa)
cAMP-dependent protein kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B5EE0
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:CDX25716.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cAMP-dependent protein kinase regulatory subunit
SCNpilot_cont_500_bf_scaffold_1279_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13372..14055)
DNA (684bp) protein (228aa)
Two component transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NZR0_9RHIZ rbh
Two component transcriptional regulator {ECO:0000313|EMBL:EKF40541.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_cont_500_bf_scaffold_1279_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14211..14735
DNA (525bp) protein (175aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLC0_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EHK58449.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_500_bf_scaffold_1279_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14953..15318)
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM75_9RHIZ
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K09888 cell division protein ZapA
SCNpilot_cont_500_bf_scaffold_1279_16
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15328..15600)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373204C
Uncharacterized protein {ECO:0000313|EMBL:ESZ21889.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_17
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15871..17832
DNA (1962bp) protein (654aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
UPI0003CE814A related cluster n=1 Tax=unknown RepID=UPI0003CE814A
transketolase
SCNpilot_cont_500_bf_scaffold_1279_18
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17908..18918
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E5164D
SCNpilot_cont_500_bf_scaffold_1279_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19113..19274)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM63_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58255.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_20
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19466..21367
DNA (1902bp) protein (634aa)
UPI0003CEDE1C related cluster n=1 Tax=unknown RepID=UPI0003CEDE1C
Acyl-CoA synthetase {ECO:0000313|EMBL:ESY65058.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
acyl-CoA synthetase/AMP-acid ligase
SCNpilot_cont_500_bf_scaffold_1279_21
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21469..21648
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003712AB9
Uncharacterized protein {ECO:0000313|EMBL:CDX34495.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_22
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21799..22509
DNA (711bp) protein (237aa)
DeoR faimly transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030C2A89
Type 11 helix-turn-helix protein {ECO:0000313|EMBL:EIM75156.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Helix-turn-helix type 11 domain-containing protein
SCNpilot_cont_500_bf_scaffold_1279_23
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22506..22901)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=1 Tax=Reinekea blandensis MED297 RepID=A4BCV0_9GAMM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EAR10032.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
pyrimidine utilization protein C
SCNpilot_cont_500_bf_scaffold_1279_24
Mesorhizobium sp. L2C085B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22932..23675)
DNA (744bp) protein (248aa)
Uncharacterized protein n=5 Tax=Mesorhizobium RepID=V7EXE1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ11662.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C085B000.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24567..25571)
DNA (1005bp) protein (335aa)
NAD(P)H quinone oxidoreductase, PIG3 family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM37_9RHIZ
NAD(P)H quinone oxidoreductase, PIG3 family protein {ECO:0000313|EMBL:EHK58229.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NAD(P)H quinone oxidoreductase, PIG3 family
SCNpilot_cont_500_bf_scaffold_1279_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25695..25889
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX34477.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1279_27
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25979..27259
DNA (1281bp) protein (427aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HM39_9RHIZ
Transmembrane transport protein {ECO:0000313|EMBL:CDX34811.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_1279_28
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27303..27794)
DNA (492bp) protein (164aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Putative malonic semialdehyde oxidative decarboxylase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N489_RHOPA
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EZQ17680.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Displaying 28 items

View Taxonomy