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SCNpilot_cont_500_bf_scaffold_1379

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1379_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1303
DNA (1302bp) protein (434aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003CFF31F related cluster n=1 Tax=unknown RepID=UPI0003CFF31F
xylose isomerase
SCNpilot_cont_500_bf_scaffold_1379_2
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1339..2796
DNA (1458bp) protein (486aa)
D-mannonate oxidoreductase {ECO:0000313|EMBL:EPX82577.1}; EC=1.1.1.57 {ECO:0000313|EMBL:EPX82577.1};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
uxuB; D-mannonate oxidoreductase (EC:1.1.1.57); K00040 fructuronate reductase [EC:1.1.1.57] rbh
D-mannonate oxidoreductase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QSJ7_9RHOB rbh
SCNpilot_cont_500_bf_scaffold_1379_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2845..3729
DNA (885bp) protein (295aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F76C11 rbh
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EHK56075.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_1379_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3743..4417
DNA (675bp) protein (225aa)
GntR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HT75_9RHIZ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EHK56074.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator, GntR family
SCNpilot_cont_500_bf_scaffold_1379_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4509..5843
DNA (1335bp) protein (445aa)
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FUN3_9RHIZ rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX83235.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1379_6
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5843..6769
DNA (927bp) protein (309aa)
UPI0003CFAC8B related cluster n=1 Tax=unknown RepID=UPI0003CFAC8B
ABC transporter permease {ECO:0000313|EMBL:ESZ21968.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_1379_7
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6766..7587
DNA (822bp) protein (274aa)
Sugar ABC transporter permease n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GH33_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:ESX86475.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_1379_8
unknown

Not on your lists

comp(7516..7992)
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1379_9
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8002..9231)
DNA (1230bp) protein (410aa)
lldA; L-lactate cytochrome reductase (EC:1.1.2.3)
L-lactate cytochrome reductase LldA {ECO:0000313|EMBL:AEI82346.1}; EC=1.1.2.3 {ECO:0000313|EMBL:AEI82346.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
L-lactate cytochrome reductase LldA n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GUE2_CUPNN
SCNpilot_cont_500_bf_scaffold_1379_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9228..10481)
DNA (1254bp) protein (418aa)
HMGL-like protein id=2140744 bin=GWD2_Chloroflexi_49_16 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + rbh
aksA; homocitrate synthase AksA rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
SCNpilot_cont_500_bf_scaffold_1379_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10471..11589)
DNA (1119bp) protein (373aa)
Alpha/beta hydrolase fold n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213Z9_RHOPB rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABD88287.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_1379_12
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11586..12206)
DNA (621bp) protein (207aa)
Putative NADH-quinone reductase mdaB n=1 Tax=Dickeya sp. D s0432-1 RepID=U6ZPX3_9ENTR
mdaB; Modulator of drug activity B; K03923 modulator of drug activity B
Putative NADH-quinone reductase mdaB {ECO:0000313|EMBL:ERO59384.1}; TaxID=1231725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani D s0432-1.;"
SCNpilot_cont_500_bf_scaffold_1379_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12218..13912)
DNA (1695bp) protein (565aa)
methylmalonyl-CoA mutase N-terminal domain-containing protein; K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5H1_9BACI
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_1379_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13909..14934)
DNA (1026bp) protein (342aa)
argK; transport ATPase, component for LAO/AO transport systems; K07588 LAO/AO transport system kinase [EC:2.7.-.-]
ArgK-type transport ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ7_NATPD
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_1379_15
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14931..16124)
DNA (1194bp) protein (398aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA C-acetyltransferase n=1 Tax=Ralstonia sp. PBA RepID=I9W2G6_9RALS rbh
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EIZ02574.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
SCNpilot_cont_500_bf_scaffold_1379_16
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16121..17635)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HWX2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGF67889.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
o-succinylbenzoate--CoA ligase
SCNpilot_cont_500_bf_scaffold_1379_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17622..18068)
DNA (447bp) protein (149aa)
methylmalonyl-CoA mutase domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
Methylmalonyl-CoA mutase domain-containing protein n=4 Tax=Thermoanaerobacter RepID=G2MXS9_9THEO
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_500_bf_scaffold_1379_18
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18187..19104)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D3543D rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC48806.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
oxyR2; PsfB
SCNpilot_cont_500_bf_scaffold_1379_19
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19255..21318)
DNA (2064bp) protein (688aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] rbh
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000364E486 rbh
5-oxoprolinase {ECO:0000313|EMBL:AHV97640.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
SCNpilot_cont_500_bf_scaffold_1379_20
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21308..21775)
DNA (468bp) protein (156aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:ABQ70565.1}; EC=3.5.2.9 {ECO:0000313|EMBL:ABQ70565.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030BBA1B
SCNpilot_cont_500_bf_scaffold_1379_21
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21864..22964)
DNA (1101bp) protein (367aa)
hydantoinase B/oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030BBA1B rbh
Hydantoinase {ECO:0000313|EMBL:ERI37900.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
SCNpilot_cont_500_bf_scaffold_1379_22
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23300..24358)
DNA (1059bp) protein (353aa)
ABC transporter (EC:3.6.3.-)
UPI0003CEF9DF related cluster n=1 Tax=unknown RepID=UPI0003CEF9DF
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:ESY84730.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_500_bf_scaffold_1379_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(24355..25221)
DNA (867bp) protein (289aa)
Binding-protein-dependent transport system inner membrane component family protein 62 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXG6_ACHXA
binding-protein-dependent transporter inner membrane component family protein 62; K02053 putative spermidine/putrescine transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCNpilot_cont_500_bf_scaffold_1379_24
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25229..26131)
DNA (903bp) protein (301aa)
UPI0003CEF3A5 related cluster n=1 Tax=unknown RepID=UPI0003CEF3A5
ABC transporter permease {ECO:0000313|EMBL:ESY84731.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
binding-protein-dependent transporter inner membrane component family protein 61
SCNpilot_cont_500_bf_scaffold_1379_25
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26220..27239)
DNA (1020bp) protein (340aa)
UPI0003CF08B3 related cluster n=2 Tax=unknown RepID=UPI0003CF08B3
Uncharacterized protein {ECO:0000313|EMBL:ESY85093.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
Tat pathway signal sequence domain-containing protein 25
SCNpilot_cont_500_bf_scaffold_1379_26
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27309..27935)
DNA (627bp) protein (209aa)
Gll0959 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM10_GLOVI
hypothetical protein; K09967 hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_cont_500_bf_scaffold_1379_27
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28289..29350
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC4A40 rbh
Transporter {ECO:0000313|EMBL:KGJ20847.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
dctP3; TRAP transporter subunit DctP
SCNpilot_cont_500_bf_scaffold_1379_28
Pseudomonas sp. WCS358, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29361..29912
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031FD489
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KEY87715.1}; TaxID=1495066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. WCS358.;"
TRAP C4-dicarboxylate transport system subunit DctQ
SCNpilot_cont_500_bf_scaffold_1379_29
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29909..31195
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031DC143 rbh
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EDQ33541.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1379_30
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31247..31687)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035CA1AB
Uncharacterized protein {ECO:0000313|EMBL:EJE51836.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Displaying items 1-30 of 31 in total

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