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SCNpilot_cont_500_bf_scaffold_1507

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1507_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..241)
DNA (240bp) protein (80aa)
Propanoyl-CoA C-acyltransferase id=4885150 bin=GWC2_Methylomirabilis_70_16 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA acetyltransferase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_1507_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

343..1158
DNA (816bp) protein (272aa)
Probable enoyl CoA hydratase id=4885152 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl CoA hydratase
Tax=GWC2_Rokubacteria_70_16_curated
SCNpilot_cont_500_bf_scaffold_1507_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1186..2583
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Rhodococcus RepID=UPI00036ECACF
phenylacetate-CoA ligase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_1507_4
unknown

Not on your lists

2580..2768
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1507_5
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2844..3599
DNA (756bp) protein (252aa)
Transcriptional regulator n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HAN3_9PROT
Transcriptional regulator {ECO:0000313|EMBL:EKV27623.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1507_6
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3841..5070
DNA (1230bp) protein (410aa)
Extracellular ligand-binding receptor n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46M45_CUPPJ rbh
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AAZ65785.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_500_bf_scaffold_1507_7
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5153..6028
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP77_CUPPJ rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AAZ65786.1}; Putative ABC transporter permease protein {ECO:0000313|EMBL:AAR31060.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_500_bf_scaffold_1507_8
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6037..7023
DNA (987bp) protein (329aa)
Inner-membrane translocator n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP76_CUPPJ rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:AAZ65787.1}; Putative ABC transporter permease protein {ECO:0000313|EMBL:AAR31061.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_500_bf_scaffold_1507_9
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7020..7775
DNA (756bp) protein (252aa)
ABC transporter related n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP75_CUPPJ
ABC transporter related; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter related {ECO:0000313|EMBL:AAZ65788.1}; Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AAR31062.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_500_bf_scaffold_1507_10
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7768..8466
DNA (699bp) protein (233aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4851660 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
SCNpilot_cont_500_bf_scaffold_1507_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8508..9971
DNA (1464bp) protein (488aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K00244 fumarate reductase flavoprotein subunit [EC:1.3.99.1]
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4QVM0_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR23807.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SCNpilot_cont_500_bf_scaffold_1507_12
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10018..10785
DNA (768bp) protein (256aa)
Putative oxidoreductase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q6UP79_CUPPJ
Short-chain dehydrogenase/reductase SDR
Putative oxidoreductase {ECO:0000313|EMBL:AAR31058.1}; Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AAZ65784.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_500_bf_scaffold_1507_13
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10793..12427
DNA (1635bp) protein (545aa)
ditJ; DitJ-like CoA ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036B0645
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EJZ12147.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 25954.;"
SCNpilot_cont_500_bf_scaffold_1507_14
Vibrio orientalis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12427..13170
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MT21_9ACTO
NADP-dependent dehydrogenase {ECO:0000313|EMBL:EGU45986.1}; TaxID=675816 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio orientalis CIP 102891 = ATCC 33934.;"
short-chain alcohol dehydrogenase
SCNpilot_cont_500_bf_scaffold_1507_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13167..14246
DNA (1080bp) protein (360aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V4E3_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KJR63777.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1507_16
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14409..15014)
DNA (606bp) protein (202aa)
Thiamine-phosphate synthase {ECO:0000256|RuleBase:RU003826}; EC=2.5.1.3 {ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|RuleBase:RU003826}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase n=1 Tax=Nitratireductor indicus C115 RepID=K2P6U8_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1507_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15011..15781)
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Thiazole synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUB5_9RHIZ
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG
SCNpilot_cont_500_bf_scaffold_1507_18
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15783..15995)
DNA (213bp) protein (71aa)
Thiamin biosynthesis ThiG n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98AZ5_RHILO
sulfur carrier protein ThiS; K03154 sulfur carrier protein
Thiamin biosynthesis ThiG {ECO:0000313|EMBL:BAB52177.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_500_bf_scaffold_1507_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16014..16988)
DNA (975bp) protein (325aa)
thiO; thiamine biosynthesis glycine oxidase (EC:1.4.3.19); K03153 glycine oxidase [EC:1.4.3.19] rbh
Thiamine biosynthesis glycine oxidase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q546_RHIE6 rbh
Thiamine biosynthesis glycine oxidase {ECO:0000313|EMBL:KEC70380.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
SCNpilot_cont_500_bf_scaffold_1507_20
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17540..18181)
DNA (642bp) protein (214aa)
urease accessory protein UreG n=1 Tax=Meganema perideroedes RepID=UPI0003658A56
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
urease accessory protein UreG; K03189 urease accessory protein
SCNpilot_cont_500_bf_scaffold_1507_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18178..18897)
DNA (720bp) protein (240aa)
Urease accessory protein UreF n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5W4_9RHIZ
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Urease accessory protein UreF; K03188 urease accessory protein
SCNpilot_cont_500_bf_scaffold_1507_22
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18836..19324)
DNA (489bp) protein (163aa)
Urease accessory protein UreE n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPW2_RHITR
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ureE; urease accessory protein UreE
SCNpilot_cont_500_bf_scaffold_1507_23
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19327..20496)
DNA (1170bp) protein (390aa)
ureC; urease subunit alpha; K01428 urease subunit alpha [EC:3.5.1.5]
Urease subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01953};; Urea amidohydrolase subunit alpha {ECO:0000255|HAMAP-Rule:MF_01953}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
Urease subunit alpha n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=URE1_MESSB
SCNpilot_cont_500_bf_scaffold_1507_24
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20549..20998
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2ABS9_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57964.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
SCNpilot_cont_500_bf_scaffold_1507_25
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20962..21267)
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
urease subunit beta; K01429 urease subunit beta [EC:3.5.1.5]
Urease subunit beta n=1 Tax=Sagittula stellata E-37 RepID=A3K5Z3_9RHOB
SCNpilot_cont_500_bf_scaffold_1507_26
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21275..21868)
DNA (594bp) protein (198aa)
Protein hupE n=3 Tax=Mesorhizobium RepID=V7GG34_9RHIZ
Protein hupE {ECO:0000313|EMBL:ESZ67386.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
urease accessory protein UreJ; K03192 urease accessory protein
SCNpilot_cont_500_bf_scaffold_1507_27
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21904..22158)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5V5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX16675.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein; K09984 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1507_28
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22178..22480)
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
urease subunit gamma; K01430 urease subunit gamma [EC:3.5.1.5]
Urease subunit gamma n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KF35_9RHIZ
SCNpilot_cont_500_bf_scaffold_1507_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22490..23341)
DNA (852bp) protein (284aa)
Urease accessory protein UreD n=2 Tax=Rhizobium etli RepID=URED_RHIEC
Urease accessory protein UreD {ECO:0000255|HAMAP-Rule:MF_01384}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
ureD; urease accessory protein UreD
SCNpilot_cont_500_bf_scaffold_1507_30
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23307..24002)
DNA (696bp) protein (232aa)
Urea ABC transporter ATP-binding protein UrtE n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9A3_9RHIZ
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX26167.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
urea ABC transporter, ATP-binding protein UrtE
Displaying items 1-30 of 35 in total

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