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SCNpilot_cont_500_bf_scaffold_1601

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1601_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..646)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTV9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80289.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_2
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646..1833)
DNA (1188bp) protein (396aa)
Phage portal protein, HK97 family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LPZ1_9RHIZ rbh
Portal protein {ECO:0000313|EMBL:EXL10075.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
phage portal protein, HK97 family protein
SCNpilot_cont_500_bf_scaffold_1601_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1996..3306)
DNA (1311bp) protein (437aa)
Phage DNA packaging protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZI7_9RHIZ rbh
Phage DNA packaging protein {ECO:0000313|EMBL:EKF40628.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Phage DNA packaging protein
SCNpilot_cont_500_bf_scaffold_1601_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3257..3727)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PHN6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ16851.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_5
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4007..5815)
DNA (1809bp) protein (603aa)
FAD-dependent oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003744EB8 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDX29866.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative flavoprotein involved in K+ transport
SCNpilot_cont_500_bf_scaffold_1601_6
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5978..8356
DNA (2379bp) protein (793aa)
penicillin-binding protein (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
penicillin-binding protein 1A n=1 Tax=Hoeflea sp. 108 RepID=UPI0003822665
Penicillin-binding protein 1A {ECO:0000313|EMBL:ESY71479.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCNpilot_cont_500_bf_scaffold_1601_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..9008
DNA (582bp) protein (194aa)
UPI0003CEFD9F related cluster n=1 Tax=unknown RepID=UPI0003CEFD9F
Uncharacterized protein {ECO:0000313|EMBL:EXL10079.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_8
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9005..9544
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELR8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV05148.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_9
unknown

Not on your lists

comp(9573..9767)
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1601_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9927..10874
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ELT9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX18812.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_11
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10876..11223)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00038272DF
Uncharacterized protein {ECO:0000313|EMBL:ESY69729.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11275..12036)
DNA (762bp) protein (254aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MR10_9RHIZ
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:EKF19792.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
putative peptidoglycan-binding domain-containing protein
SCNpilot_cont_500_bf_scaffold_1601_13
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12011..13795)
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
integral membrane sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
UPI0003CF7913 related cluster n=1 Tax=unknown RepID=UPI0003CF7913
SCNpilot_cont_500_bf_scaffold_1601_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14263..14589
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LPZ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF19794.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14672..15103
DNA (432bp) protein (144aa)
Fe-S metabolism associated SufE n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0D1_9RHIZ
Fe-S metabolism associated SufE {ECO:0000313|EMBL:EHK53591.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SufE protein probably involved in Fe-S center assembly
SCNpilot_cont_500_bf_scaffold_1601_16
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15116..15949)
DNA (834bp) protein (278aa)
Conserved hypothetical cytosolic protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11K01_MESSB
hypothetical protein
Conserved hypothetical cytosolic protein {ECO:0000313|EMBL:ABG62274.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_1601_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15950..16381)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E506EE
Chromosomal replication initiator DnaA-like protein {ECO:0000313|EMBL:EKF40616.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
chromosomal replication initiator DnaA-like protein
SCNpilot_cont_500_bf_scaffold_1601_18
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16592..16807
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NMI3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFB10673.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_19
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16961..17386)
DNA (426bp) protein (142aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FKZ2_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:ESW83178.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1601_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17878..19149
DNA (1272bp) protein (424aa)
peptidase S9 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D52BAD
Oligopeptidase B {ECO:0000313|EMBL:CDX41760.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
protease II
SCNpilot_cont_500_bf_scaffold_1601_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19133..19924
DNA (792bp) protein (264aa)
aminopeptidase; K01354 oligopeptidase B [EC:3.4.21.83]
peptidase S9 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D52BAD
Oligopeptidase B {ECO:0000313|EMBL:EHK53584.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_1601_22
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20031..20963)
DNA (933bp) protein (311aa)
UPI0003CE9461 related cluster n=1 Tax=unknown RepID=UPI0003CE9461
Diacylglycerol kinase {ECO:0000313|EMBL:ESY81926.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
cytochrome c, mono- and diheme variants family
SCNpilot_cont_500_bf_scaffold_1601_23
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20973..21416)
DNA (444bp) protein (148aa)
Cytochrome c signal peptide protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MGI4_9RHIZ
Cytochrome c signal peptide protein {ECO:0000313|EMBL:EKF19810.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
cytochrome c signal peptide protein
SCNpilot_cont_500_bf_scaffold_1601_24
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21597..22196)
DNA (600bp) protein (200aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
manganese/iron superoxide dismutase-like protein; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Nitratireductor indicus C115 RepID=K2PHL8_9RHIZ rbh
SCNpilot_cont_500_bf_scaffold_1601_25
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22297..23175)
DNA (879bp) protein (293aa)
class IV aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
PREDICTED: branched-chain-amino-acid aminotransferase-like protein 2-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1B1FD
Aminotransferase class IV {ECO:0000313|EMBL:CDX35223.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_500_bf_scaffold_1601_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23337..23999
DNA (663bp) protein (221aa)
(S)-2-haloacid dehalogenase 4A {ECO:0000313|EMBL:CDX35220.1}; EC=3.8.1.2 {ECO:0000313|EMBL:CDX35220.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
haloacid dehalogenase, type II (EC:3.8.1.2); K01560 2-haloacid dehalogenase [EC:3.8.1.2]
haloacid dehalogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CB849
SCNpilot_cont_500_bf_scaffold_1601_27
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24174..24884
DNA (711bp) protein (237aa)
UPI0003CE6390 related cluster n=1 Tax=unknown RepID=UPI0003CE6390
Uncharacterized protein {ECO:0000313|EMBL:ESW92290.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1601_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24972..26495)
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C5DEA
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53576.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K06915
SCNpilot_cont_500_bf_scaffold_1601_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26693..28132
DNA (1440bp) protein (480aa)
methylmalonyl-CoA mutase; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2]
Methylmalonyl-CoA mutase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0B5_9RHIZ
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EHK53575.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_1601_30
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28129..30282
DNA (2154bp) protein (718aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EHK53574.1}; EC=5.4.99.2 {ECO:0000313|EMBL:EHK53574.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
methylmalonyl-CoA mutase; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0B4_9RHIZ rbh
Displaying items 1-30 of 41 in total

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