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SCNpilot_cont_500_bf_scaffold_1641

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1641_1
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..865)
DNA (864bp) protein (288aa)
ABC transporter permease protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P134_9RHOB
ABC transporter permease protein {ECO:0000313|EMBL:EAV41219.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1641_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(877..1743)
DNA (867bp) protein (289aa)
Putative permease component of ABC transporter n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M507_RHIL3
ABC transporter permease {ECO:0000313|EMBL:KGT75335.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
putative permease component of ABC transporter; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_1641_3
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1748..2455)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000375B13A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ10617.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1641_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2452..3168)
DNA (717bp) protein (239aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMW0_VARPD
putative branched-chain amino acid ABC transporter, ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU53599.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_cont_500_bf_scaffold_1641_5

Not on your lists

comp(3245..4540)
DNA (1296bp) protein (432aa)
Branched-chain amino acid ABC transporter, substrate-binding protein n=2 Tax=uncultured bacterium RepID=C6KVE9_9BACT
Branched-chain amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:BAH89761.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative branched-chain amino acid ABC transporter substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1641_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..5337
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI000374804B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_500_bf_scaffold_1641_7
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5365..7620)
DNA (2256bp) protein (752aa)
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase; K11177 xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4] rbh
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding protein n=1 Tax=Citreicella sp. 357 RepID=I1AXP4_9RHOB rbh
Dehydrogenase {ECO:0000313|EMBL:KEQ10634.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
SCNpilot_cont_500_bf_scaffold_1641_8
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7610..8668)
DNA (1059bp) protein (353aa)
oxidoreductase, FAD-binding subunit; molybdopterin oxidoreductase, xanthine dehydrogenase family; K11178 xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
FAD-binding molybdopterin dehydrogenase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000349D96A
Molybdopterin dehydrogenase {ECO:0000313|EMBL:KEQ10635.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
SCNpilot_cont_500_bf_scaffold_1641_9
bacterium YEK0313, Bacteria

Not on your lists

comp(8665..9177)
DNA (513bp) protein (171aa)
oxidoreductase with iron-sulfur subunit (EC:1.2.99.2)
Aldehyde oxidoreductase (Molybdenum iron sulfurprotein) n=1 Tax=Citreicella sp. SE45 RepID=D0DCY0_9RHOB
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:CEJ12968.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_1641_10
bacterium YEK0313, Bacteria

Not on your lists


9377..9955
DNA (579bp) protein (193aa)
50S ribosomal protein L21 n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1I8S9_9BRAD
HTH-type transcriptional regulator MtrR {ECO:0000313|EMBL:CEJ12969.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative transcriptional regulatory protein TetR family
SCNpilot_cont_500_bf_scaffold_1641_11
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9988..10782)
DNA (795bp) protein (265aa)
Pca regulon regulatory protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFD2_9RHIZ
Pca regulon regulatory protein {ECO:0000313|EMBL:CCV10724.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family
SCNpilot_cont_500_bf_scaffold_1641_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10847..11566
DNA (720bp) protein (240aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.6); K01031 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003042BA9 rbh
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:EZQ15495.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_500_bf_scaffold_1641_13
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11563..12234
DNA (672bp) protein (224aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01032 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] rbh
3-oxoadipate CoA-transferase beta subunit {ECO:0000313|EMBL:ABL73081.1}; EC=2.8.3.8 {ECO:0000313|EMBL:ABL73081.1};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
3-oxoadipate CoA-transferase subunit B n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F470BB rbh
SCNpilot_cont_500_bf_scaffold_1641_14
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12236..13441
DNA (1206bp) protein (402aa)
beta-ketoadipyl CoA thiolase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
acetyl-CoA acetyltransferase n=1 Tax=Rhizobium loti RepID=UPI000378E1A5
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:AID33211.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_1641_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..14428)
DNA (975bp) protein (325aa)
AraC family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN31_9RHIZ rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EHK57825.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
SCNpilot_cont_500_bf_scaffold_1641_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14506..15429
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN32_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57826.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1641_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15440..16504
DNA (1065bp) protein (355aa)
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
L-carnitine dehydrogenase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN34_9RHIZ
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
SCNpilot_cont_500_bf_scaffold_1641_18
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16518..17681
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CCV09933.1}; EC=1.3.8.- {ECO:0000313|EMBL:CCV09933.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003634C98
acyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_1641_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17678..19297
DNA (1620bp) protein (540aa)
CoA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN36_9RHIZ
CoA-binding domain-containing protein {ECO:0000313|EMBL:EHK57830.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA synthetase (NDP forming)
SCNpilot_cont_500_bf_scaffold_1641_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19309..19824
DNA (516bp) protein (172aa)
CoA-binding domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN36_9RHIZ
CoA-binding domain-containing protein {ECO:0000313|EMBL:EHK57830.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
acyl-CoA synthetase (NDP forming)
SCNpilot_cont_500_bf_scaffold_1641_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19817..20599
DNA (783bp) protein (261aa)
enoyl-CoA hydratase/isomerase; K08299 carnitinyl-CoA dehydratase [EC:4.2.1.-]
Carnitinyl-CoA dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN37_9RHIZ rbh
Carnitinyl-CoA dehydratase {ECO:0000313|EMBL:EHK57831.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_500_bf_scaffold_1641_22
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20599..21543
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F0R9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV09936.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
alpha/beta hydrolase fold-3 domain-containing protein
SCNpilot_cont_500_bf_scaffold_1641_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21550..22359)
DNA (810bp) protein (270aa)
Xanthine dehydrogenase accessory protein XdhC n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN53_9RHIZ rbh
Xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:EHK57847.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
SCNpilot_cont_500_bf_scaffold_1641_24
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22390..24738)
DNA (2349bp) protein (783aa)
xanthine dehydrogenase, molybdopterin binding subunit (EC:1.17.1.4); K13482 xanthine dehydrogenase large subunit [EC:1.17.1.4]
UPI0003D06F61 related cluster n=1 Tax=unknown RepID=UPI0003D06F61
Aldehyde oxidase {ECO:0000313|EMBL:ESW86886.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_500_bf_scaffold_1641_25
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24738..26210)
DNA (1473bp) protein (491aa)
xanthine dehydrogenase, xdhA; K13481 xanthine dehydrogenase small subunit [EC:1.17.1.4]
FAD-binding molybdopterin dehydrogenase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000303C4A0
Xanthine dehydrogenase XdhA {ECO:0000313|EMBL:CDX41127.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_500_bf_scaffold_1641_26
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26213..26578)
DNA (366bp) protein (122aa)
hydroxyisourate hydrolase (EC:3.5.2.17); K07127 5-hydroxyisourate hydrolase [EC:3.5.2.17]
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003D00EF4 related cluster n=1 Tax=unknown RepID=UPI0003D00EF4
SCNpilot_cont_500_bf_scaffold_1641_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26913..28376
DNA (1464bp) protein (488aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN49_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57843.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
polysaccharide deacetylase rbh
SCNpilot_cont_500_bf_scaffold_1641_28
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28387..29217
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BX71_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX26837.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
putative allantoin catabolism protein
SCNpilot_cont_500_bf_scaffold_1641_29
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29214..29708
DNA (495bp) protein (165aa)
ureidoglycolate hydrolase (EC:3.5.3.19); K01483 ureidoglycolate hydrolase [EC:3.5.3.19]
Ureidoglycolate lyase {ECO:0000255|HAMAP-Rule:MF_00616}; EC=4.3.2.3 {ECO:0000255|HAMAP-Rule:MF_00616};; Ureidoglycolatase {ECO:0000255|HAMAP-Rule:MF_00616}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
ureidoglycolate hydrolase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D29178
SCNpilot_cont_500_bf_scaffold_1641_30
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29718..30311
DNA (594bp) protein (198aa)
UPI0003CE1811 related cluster n=1 Tax=unknown RepID=UPI0003CE1811
Cytidine deaminase {ECO:0000313|EMBL:ESX61908.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
CMP/dCMP deaminase zinc-binding protein
Displaying items 1-30 of 31 in total

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