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SCNpilot_cont_500_bf_scaffold_1684

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1684_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B8J9_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK56385.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_500_bf_scaffold_1684_2
unknown

Not on your lists

comp(722..988)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1684_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1062..1376)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036AC66E
Uncharacterized protein {ECO:0000313|EMBL:KFC63740.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1684_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1428..1925)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000375C82E
Uncharacterized protein {ECO:0000313|EMBL:EKS38602.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
blue (type1) copper domain-containing protein
SCNpilot_cont_500_bf_scaffold_1684_5
Pedomicrobium sp. ACM 3067, Pedomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1951..3336)
DNA (1386bp) protein (462aa)
Manganese oxidising multicopper oxidase n=1 Tax=Pedomicrobium sp. ACM 3067 RepID=Q2WCM0_9RHIZ
Manganese oxidising multicopper oxidase {ECO:0000313|EMBL:CAJ19378.1}; TaxID=338054 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pedomicrobium.;" source="Pedomicrobium sp. ACM 3067.;"
multicopper oxidase type 3
SCNpilot_cont_500_bf_scaffold_1684_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3352..4671)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003663A94
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABS70038.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_1684_7
Pedomicrobium sp. ACM 3067, Pedomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..5065)
DNA (246bp) protein (82aa)
Putative uncharacterized protein moxC n=1 Tax=Pedomicrobium sp. ACM 3067 RepID=Q2WCM2_9RHIZ
Putative uncharacterized protein moxC {ECO:0000313|EMBL:CAJ19376.1}; TaxID=338054 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pedomicrobium.;" source="Pedomicrobium sp. ACM 3067.;"
SCNpilot_cont_500_bf_scaffold_1684_8
unknown

Not on your lists

5607..5957
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1684_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5844..6755)
DNA (912bp) protein (304aa)
Copper resistance D domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N0_9BRAD
Copper resistance protein D {ECO:0000313|EMBL:CEG10172.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative copper resistance protein D; K07245 putative copper resistance protein D
SCNpilot_cont_500_bf_scaffold_1684_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6755..7126)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036ACCE1
Copper resistance protein CopC {ECO:0000313|EMBL:EFI52911.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
copper resistance protein C; K07156
SCNpilot_cont_500_bf_scaffold_1684_11
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7300..7497)
DNA (198bp) protein (66aa)
UPF0060 membrane protein MPQ_1406 n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QP70_METS6
hypothetical protein; K09771 hypothetical protein
UPF0060 membrane protein T9A_00016 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
SCNpilot_cont_500_bf_scaffold_1684_12
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7633..7899
DNA (267bp) protein (89aa)
Putative Thioredoxin/glutaredoxin n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA4_THIA3
putative Thioredoxin/glutaredoxin
Putative Thioredoxin/glutaredoxin {ECO:0000313|EMBL:CAZ89682.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCNpilot_cont_500_bf_scaffold_1684_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7900..8301
DNA (402bp) protein (134aa)
Putative MerR family regulatory protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CMA3_THIA3
putative MerR family regulatory protein
Putative MerR family regulatory protein {ECO:0000313|EMBL:CAZ89681.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCNpilot_cont_500_bf_scaffold_1684_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..10506)
DNA (1986bp) protein (662aa)
Glycoside hydrolase n=1 Tax=Pseudomonas aeruginosa VRFPA01 RepID=V4QZY3_PSEAI rbh
Glycoside hydrolase {ECO:0000313|EMBL:KFF32950.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA01.;"
glycoside hydrolase family protein rbh
SCNpilot_cont_500_bf_scaffold_1684_15
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10656..11489)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EXN4_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:ESX20461.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1684_16
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11512..13158)
DNA (1647bp) protein (549aa)
carbamoyltransferase; K04128 hydroxymethyl cephem carbamoyltransferase [EC:2.1.3.7] rbh
Proline dehydrogenase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7EV75_9RHIZ rbh
Proline dehydrogenase {ECO:0000313|EMBL:ESX20460.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
SCNpilot_cont_500_bf_scaffold_1684_17
unknown

Not on your lists

14172..14519
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1684_18
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15193..16503
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JND9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT48563.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1684_19
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17086..18678
DNA (1593bp) protein (531aa)
Resolvase domain protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVH3_HYPDA rbh
resolvase rbh
Resolvase domain protein {ECO:0000313|EMBL:ADJ24827.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_1684_20
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19224..19481
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVH4_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24828.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_500_bf_scaffold_1684_21
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19561..19782)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVH5_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ24829.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Displaying 21 items

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