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SCNpilot_cont_500_bf_scaffold_1943

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1943_1
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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111..707
DNA (597bp) protein (199aa)
glutathione S-transferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003122F03
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AEH89626.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_1943_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(774..1436)
DNA (663bp) protein (221aa)
Porin n=1 Tax=Nitratireductor indicus C115 RepID=K2NY79_9RHIZ
Porin {ECO:0000313|EMBL:EKF42879.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1943_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1765..2529
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003792BE5
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV13825.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_1943_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2556..4613
DNA (2058bp) protein (686aa)
UvrABC system protein C n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQG6_9RHIZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
SCNpilot_cont_500_bf_scaffold_1943_5
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4716..5300
DNA (585bp) protein (195aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKP8_RHITR
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KGF69215.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
SCNpilot_cont_500_bf_scaffold_1943_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5284..5574
DNA (291bp) protein (97aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003119F17
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
molybdopterin converting factor subunit 1; K03636 molybdopterin synthase sulfur carrier subunit
SCNpilot_cont_500_bf_scaffold_1943_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5578..6051
DNA (474bp) protein (158aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGZ9_9RHIZ
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:ESX75492.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_500_bf_scaffold_1943_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6218..8476
DNA (2259bp) protein (753aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Nitratireductor indicus C115 RepID=K2PP73_9RHIZ rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EKF42887.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_cont_500_bf_scaffold_1943_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8502..8924)
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=NDK_MESSB
SCNpilot_cont_500_bf_scaffold_1943_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9098..9610
DNA (513bp) protein (171aa)
Mlr7920 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984N6_RHILO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA72260.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_500_bf_scaffold_1943_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9713..11590
DNA (1878bp) protein (626aa)
ABC transporter, ATP-binding component n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQF4_9RHIZ rbh
ABC transporter, ATP-binding component {ECO:0000313|EMBL:EHK57039.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ATPase component of ABC transporters with duplicated ATPase domain rbh
SCNpilot_cont_500_bf_scaffold_1943_12
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11947..13227
DNA (1281bp) protein (427aa)
UPI0003CEDBCF related cluster n=1 Tax=unknown RepID=UPI0003CEDBCF
Membrane protein {ECO:0000313|EMBL:ESY83954.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
metalloendopeptidase-like membrane protein
SCNpilot_cont_500_bf_scaffold_1943_13
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13238..13585)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377015A
Uncharacterized protein {ECO:0000313|EMBL:EXL08796.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1943_14
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13805..14449
DNA (645bp) protein (215aa)
UPI0003CE8FC1 related cluster n=1 Tax=unknown RepID=UPI0003CE8FC1
Nuclease PIN {ECO:0000313|EMBL:ESY04265.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
putative phosphate transport regulator; K07220 hypothetical protein
SCNpilot_cont_500_bf_scaffold_1943_15
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14458..15462
DNA (1005bp) protein (335aa)
Inorganic phosphate transporter n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMA0_9RHIZ
Inorganic phosphate transporter {ECO:0000313|EMBL:ESX81363.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
putative low-affinity inorganic phosphate transporter
SCNpilot_cont_500_bf_scaffold_1943_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15557..16045
DNA (489bp) protein (163aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003796DAA
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11877.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
RDD domain-containing protein
Displaying 16 items

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