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SCNpilot_cont_500_bf_scaffold_694_20

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: 19799..20593

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IW04_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 253.0
  • Bit_score: 235
  • Evalue 8.10e-59
ABC transporter permease {ECO:0000313|EMBL:KAJ32572.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 261.0
  • Bit_score: 292
  • Evalue 7.80e-76
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 253.0
  • Bit_score: 235
  • Evalue 2.60e-59

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGAGCGGTCTCTCGCTCTGGACCAGGCTGCTCGTCGCCGCGGTTATCGTGTTCCTGGCGGCGCCGGTCATCATTATCGTTTCGGTCGCTTTCACGTCCGCGGAATTCGTCACCTTCCCGCCGACAGGATTTTCGCTGCGCTGGTTCCACCAGGTGCTTACCGATACGCAGTTCATGATCCCCCTCTGGAACAGCTTTCTGCTCGGTATCTTCTCGACCGCCGTAAGCACCCTTCTGGCCGTTCCCGCGGCAATAACGCTCGTCCGCAACGATTTGCGAATGAAGACCGCCATTTCGGCCTTTATGCTTTCGCCCCTCAGCCTGCCGTTAATCATACTCGCCACGGCGCTCCTATTCTTCCTCGCCCGCTTCGGGCTCGGGACGTCTCCGGTGGGGCTGCTGATCGGCCATGTTGTCATCACTGTACCCTATGTGCTGAGAACTGTTCTAGGAGTCTACGCCGGCATTGGGCCGGAAGCGGAAGAGGCGGCACGAACACTTGGCGCGCGCGCATGGCAGACGTTTTGGTATGTGACCCTGCCAATGATCCGTCCCGGCCTGCTGGCAGGTGGTATCTTTGCGTTTCTTCTGTCCTTTGATGAAGTCGCTGTCGCCCTGCTGCTGTCCACCGCGGACACCATGACGCTGCCGGTCTCCGTCCTGAGCTATCTCGTCTACAATTACGATCCCGCCGTAGCGGCTATATCGACGGTGCAGATCGTGATCGTCGTCGTGCTGCTCCTGACGCTCGAACGCTTTTTCGGCGTGAAGCATCTCGTGCTGCCTTCAAAATAG
PROTEIN sequence
Length: 265
MSGLSLWTRLLVAAVIVFLAAPVIIIVSVAFTSAEFVTFPPTGFSLRWFHQVLTDTQFMIPLWNSFLLGIFSTAVSTLLAVPAAITLVRNDLRMKTAISAFMLSPLSLPLIILATALLFFLARFGLGTSPVGLLIGHVVITVPYVLRTVLGVYAGIGPEAEEAARTLGARAWQTFWYVTLPMIRPGLLAGGIFAFLLSFDEVAVALLLSTADTMTLPVSVLSYLVYNYDPAVAAISTVQIVIVVVLLLTLERFFGVKHLVLPSK*