name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_694_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..238)
|
Mlr8351 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983F5_RHILO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETA72545.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(189..1691)
|
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CF5331 related cluster n=1 Tax=unknown RepID=UPI0003CF5331
|
|
SCNpilot_cont_500_bf_scaffold_694_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2478..3881
|
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSK6_9RHIZ
rbh
Ppx/GppA phosphatase {ECO:0000313|EMBL:EHK56292.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3875..4597
|
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M8U2_9RHIZ
23S rRNA methylase
|
|
SCNpilot_cont_500_bf_scaffold_694_5
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4634..6310)
|
major facilitator transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E6732
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKF18549.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
major facilitator transporter
|
|
SCNpilot_cont_500_bf_scaffold_694_trna_1
unknown
|
Not on your lists |
6503..6573
|
transferRNA
|
|
SCNpilot_cont_500_bf_scaffold_694_6
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6944..7159
|
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003744746
Uncharacterized protein {ECO:0000313|EMBL:KGE80210.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_694_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7156..7686
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWG5_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS18720.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_500_bf_scaffold_694_8
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7650..8453)
|
NAD dependent epimerase/dehydratase family protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WTU0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:GAJ95223.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_694_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8463..9743)
|
C4-dicarboxylate ABC transporter permease n=1 Tax=Amorphus coralli RepID=UPI0003693158
rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:KEZ79277.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
TRAP dicarboxylate transporter subunit DctM
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_10
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9751..10233)
|
Tripartite ATP-independent periplasmic transporter, DctQ component n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=Q1QUN3_CHRSD
tripartite ATP-independent periplasmic transporter DctQ
Tripartite ATP-independent periplasmic transporter, DctQ component {ECO:0000313|EMBL:ABE59825.1}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
|
|
SCNpilot_cont_500_bf_scaffold_694_11
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10380..11372)
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036792C7
rbh
TRAP transporter substrate-binding protein {ECO:0000313|EMBL:KEZ79275.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
TRAP transporter substrate-binding protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_12
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11546..12304
|
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000370199E
rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KEZ79274.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
GntR family transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_694_13
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12397..13302
|
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694, ECO:0000313|EMBL:CDN55781.1}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
5-dehydro-4-deoxyglucarate dehydratase; K01707 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41]
rbh
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Rhizobium sp. CF080 RepID=J3BPE4_9RHIZ
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_14
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13299..14435
|
mandelate racemase/muconate lactonizing enzyme (EC:4.2.1.6)
rbh
mandelate racemase n=1 Tax=Amorphus coralli RepID=UPI000364F50C
rbh
Mandelate racemase {ECO:0000313|EMBL:EPC00935.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_15
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14435..15307
|
amidohydrolase n=1 Tax=Halomonas sp. KM-1 RepID=UPI00028A2ECB
rbh
Amidohydrolase 2 {ECO:0000313|EMBL:ENO16053.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
amidohydrolase 2; K07046
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria
|
Not on your lists |
15589..16347
|
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000382965E
Tax=RBG_16_Chloroflexi_56_8_curated
|
|
SCNpilot_cont_500_bf_scaffold_694_17
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16579..17550)
|
Transcriptional regulator, LysR family n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4J6_9RHOO
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:BAL26909.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17757..18791
|
Twin-arginine translocation pathway signal n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3IZ84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KAJ32577.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
family 1 extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
|
|
SCNpilot_cont_500_bf_scaffold_694_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18921..19802
|
ABC transporter permease {ECO:0000313|EMBL:KAJ32573.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Putative ABC spermidine/putrescine transporter permease protein id=4565336 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein
|
|
SCNpilot_cont_500_bf_scaffold_694_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19799..20593
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IW04_METNO
ABC transporter permease {ECO:0000313|EMBL:KAJ32572.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
|
|
SCNpilot_cont_500_bf_scaffold_694_21
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20605..21717
|
ABC transporter ATP-binding protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZG1_THERP
PotA protein {ECO:0000313|EMBL:BAQ44845.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
ABC transporter ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
|
|
SCNpilot_cont_500_bf_scaffold_694_22
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21962..23398
|
Cytosine deaminase {ECO:0000313|EMBL:EAQ98399.2}; EC=3.5.4.28 {ECO:0000313|EMBL:EAQ98399.2};; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
Cytosine deaminase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A5V2_9GAMM
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_23
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23665..24690)
|
AraC family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003775F84
rbh
AraC family transcriptional regulator
rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBS89056.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
|
|
SCNpilot_cont_500_bf_scaffold_694_24
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24799..26052
|
Sarcosine oxidase beta subunit {ECO:0000313|EMBL:KIV66585.1}; EC=1.5.3.1 {ECO:0000313|EMBL:KIV66585.1};; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
sarcosine oxidase subunit beta (EC:1.5.3.1); K00303 sarcosine oxidase, subunit beta [EC:1.5.3.1]
rbh
Sarcosine oxidase subunit beta n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D1P8_RHILU
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_25
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26063..26365
|
soxD1; sarcosine oxidase, delta subunit (EC:1.5.3.1)
Sarcosine oxidase, delta subunit n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PYL1_9RHIZ
Sarcosine oxidase, delta subunit family {ECO:0000313|EMBL:KHQ54589.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp. UMTAT08.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26362..29352
|
sarcosine oxidase alpha subunit (EC:1.5.3.1); K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1]
rbh
Sarcosine oxidase subunit alpha n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AHW3_RHIRD
rbh
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EMS97332.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29368..29922
|
sarcosine oxidase subunit gamma n=1 Tax=Rhizobium radiobacter RepID=UPI0003798B66
Sarcosine oxidase subunit gamma {ECO:0000313|EMBL:EPR08537.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
|
|
SCNpilot_cont_500_bf_scaffold_694_28
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29942..31198
|
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
rbh
serine hydroxymethyltransferase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003687696
rbh
|
|
SCNpilot_cont_500_bf_scaffold_694_29
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31266..32492
|
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17]
serine ammonia-lyase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AC1C4
L-serine dehydratase 1 {ECO:0000313|EMBL:BAF89874.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
|