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SCNpilot_cont_500_bf_scaffold_2437_7

Organism: SCNPILOT_CONT_500_BF_Rhizobiales_63_8

partial RP 30 / 55 MC: 5 BSCG 30 / 51 MC: 6 ASCG 11 / 38 MC: 5
Location: comp(4063..4275)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 132
  • Evalue 2.00e-28
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 2.40e-28
'Cold-shock' DNA-binding domain protein {ECO:0000313|EMBL:AID32042.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 69.0
  • Bit_score: 130
  • Evalue 1.10e-27

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCCCAGACTGGAACCGTAAAATTCTTCAACACCACCAAAGGCTTCGGCTTCATCACGCCGGACGGCGGCGCGAAGGACGTCTTTGTTCATATCTCCGCGCTTCAGGCTTCCGGGCTGCAGAGCCTTGTCGAAGGCCAGAAGGTGACGTTCGACACCGAGCCTGATCGCATGGGCAAGGGCCCGAAGGCGGTCAACCTTCGGGTCGACTGA
PROTEIN sequence
Length: 71
MAQTGTVKFFNTTKGFGFITPDGGAKDVFVHISALQASGLQSLVEGQKVTFDTEPDRMGKGPKAVNLRVD*