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SCNpilot_cont_500_bf_scaffold_2437

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2437_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..412)
DNA (411bp) protein (137aa)
UPI0003CE8A21 related cluster n=1 Tax=unknown RepID=UPI0003CE8A21
Chemotaxis protein CheY {ECO:0000313|EMBL:ESY62838.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
winged helix family two component transcriptional regulator; K07659 two-component system, OmpR family, phosphate regulon response regulator OmpR
SCNpilot_cont_500_bf_scaffold_2437_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(426..1007)
DNA (582bp) protein (194aa)
UPI0003CFADA1 related cluster n=1 Tax=unknown RepID=UPI0003CFADA1
MarR family transcription regulator {ECO:0000313|EMBL:CDX15843.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2437_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1264..2160
DNA (897bp) protein (299aa)
Branched-chain amino-acid aminotransferase {ECO:0000313|EMBL:CDX15839.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDX15839.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
UPI0003D021B1 related cluster n=1 Tax=unknown RepID=UPI0003D021B1
SCNpilot_cont_500_bf_scaffold_2437_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2321..2608
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPA8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57380.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2437_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2791..3432
DNA (642bp) protein (214aa)
Hydrolase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAM6_9RHIZ
Hydrolase {ECO:0000313|EMBL:EHH11200.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Zn-dependent hydrolase, glyoxylase
SCNpilot_cont_500_bf_scaffold_2437_6
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3543..3755)
DNA (213bp) protein (71aa)
Cold-shock DNA-binding protein family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GE8_MESSB
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABG63527.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_2437_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4063..4275)
DNA (213bp) protein (71aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D88B
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
'Cold-shock' DNA-binding domain protein {ECO:0000313|EMBL:AID32042.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_500_bf_scaffold_2437_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4622..5059
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JC0_MESSB
Uncharacterized protein {ECO:0000313|EMBL:CDX11932.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2437_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5217..5474
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD810
Uncharacterized protein {ECO:0000313|EMBL:EJN04349.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
hypothetical protein; K15383 MtN3 and saliva related transmembrane protein
SCNpilot_cont_500_bf_scaffold_2437_10
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5588..8629
DNA (3042bp) protein (1014aa)
UvrABC system protein B n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAL6_9RHIZ rbh
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B rbh
SCNpilot_cont_500_bf_scaffold_2437_11
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8659..8883)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J2C0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32101.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2437_12
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8947..10407)
DNA (1461bp) protein (487aa)
UPI0003CF574B related cluster n=1 Tax=unknown RepID=UPI0003CF574B
Multidrug transporter MatE {ECO:0000313|EMBL:ESY04832.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
MATE efflux family protein
SCNpilot_cont_500_bf_scaffold_2437_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10611..11036
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F09238
Glyoxalase {ECO:0000313|EMBL:ESY69002.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2437_14
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11093..11878)
DNA (786bp) protein (262aa)
Cyclohexadienyl dehydratase {ECO:0000313|EMBL:CCD93576.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCD93576.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
cyclohexadienyl dehydratase (EC:4.2.1.51); K01713 cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
Cyclohexadienyl dehydratase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SH99_9BRAD
SCNpilot_cont_500_bf_scaffold_2437_15
unknown

Not on your lists

12169..12393
DNA (225bp) protein (75aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2437_16
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12461..12931)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364FBDE
Peptidase {ECO:0000313|EMBL:EZQ14197.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
serine protease inhibitor
SCNpilot_cont_500_bf_scaffold_2437_17
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13056..13787)
DNA (732bp) protein (244aa)
GNAT family acetyltransferase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G0J0_9RHIZ rbh
GNAT family acetyltransferase {ECO:0000313|EMBL:ESX86100.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_2437_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13741..14226)
DNA (486bp) protein (162aa)
MarR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKR1_9RHIZ
MarR family transcriptional regulator {ECO:0000313|EMBL:EHK58759.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
MarR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_2437_19
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14335..15129)
DNA (795bp) protein (265aa)
gamma-glutamyl hydrolase family protein (EC:3.5.1.-); K07010 putative glutamine amidotransferase
Glutamine amidotransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IDR2_9BRAD
Glutamine amidotransferase {ECO:0000313|EMBL:ERF81785.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_2437_20
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15370..16590
DNA (1221bp) protein (407aa)
UDP-sulfoquinovose synthase; K06118 UDP-sulfoquinovose synthase [EC:3.13.1.1] rbh
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:ABG63520.1}; EC=3.13.1.1 {ECO:0000313|EMBL:ABG63520.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
UDP-sulfoquinovose synthase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GF5_MESSB rbh
SCNpilot_cont_500_bf_scaffold_2437_21
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16804..17619
DNA (816bp) protein (272aa)
Glycosyl transferase family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MAV6_9RHIZ rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EKF18055.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
glycosyl transferase family protein rbh
SCNpilot_cont_500_bf_scaffold_2437_22
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18526..19842)
DNA (1317bp) protein (439aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7N1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12115.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2437_23
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20174..20860
DNA (687bp) protein (229aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
UPI0003CEA8F1 related cluster n=1 Tax=unknown RepID=UPI0003CEA8F1
5-formyltetrahydrofolate cyclo-ligase
SCNpilot_cont_500_bf_scaffold_2437_24
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20869..21297
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TGV7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR25318.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_2437_25
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21371..22006)
DNA (636bp) protein (212aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
FMN-dependent NADH-azoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J2S7B9_9RHIZ
FMN-dependent NADH-azoreductase
SCNpilot_cont_500_bf_scaffold_2437_26
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22146..22556
DNA (411bp) protein (137aa)
Uncharacterized HTH-type transcriptional regulator YdeP n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z716_9BRAD
uncharacterized HTH-type transcriptional regulator YdeP
Uncharacterized HTH-type transcriptional regulator YdeP {ECO:0000313|EMBL:BAM89234.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_2437_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22561..23775)
DNA (1215bp) protein (405aa)
isomerase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003158A29 rbh
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EHK57409.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
mandelate racemase/muconate lactonizing protein
SCNpilot_cont_500_bf_scaffold_2437_28
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23872..24951)
DNA (1080bp) protein (360aa)
Formaldehyde dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MLE6_9RHIZ rbh
Formaldehyde dehydrogenase {ECO:0000313|EMBL:EKF18052.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
formaldehyde dehydrogenase
SCNpilot_cont_500_bf_scaffold_2437_29
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25131..25523
DNA (393bp) protein (131aa)
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJ52_MESCW
Putative hydrolase {ECO:0000313|EMBL:CDX15771.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
SCNpilot_cont_500_bf_scaffold_2437_30
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25539..26720)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B0686
Extensin-like protein {ECO:0000313|EMBL:EKF18049.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
extensin-like
Displaying items 1-30 of 50 in total

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